Mycolicibacterium smegmatis INHR1: LI99_18585
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Entry
LI99_18585 CDS
T03409
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msn03009
]
LI99_18585
Enzymes [BR:
msn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LI99_18585
Ribosome biogenesis [BR:
msn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LI99_18585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIU15489
UniProt:
A0A8B4R6J2
LinkDB
All DBs
Position
complement(3804952..3805695)
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AA seq
247 aa
AA seq
DB search
MAEEQGVRLQKVLSQAGIASRRVAERMIIDGRVEVDGQIVTELGTRVDPAVADIRVDGSR
IILDDTMVYLAINKPRGMHSTMSDDRGRPCVGDLVEHRVRGNKKLFHVGRLDADTEGLLL
LTNDGELAHRLMHPSFEVPKTYVATVMGTVPRGLGKKLKAGVELDDGPAHVDDFAVVDTV
PGKTMVKVTLHEGRNRIVRRLLAAVDFPVQELVRTEIGSVSLGDQRPGSIRALTRKEVGE
LYQAVGL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaacaaggtgtgcgactgcagaaagtgttgtcgcaggcaggaattgcgtcg
cggcgcgtagccgagcggatgatcatcgacggtcgcgtcgaggtcgacgggcagatcgtg
accgagctgggcacgcgggtggaccccgcggtggccgacatccgggtcgacggttcgcgc
atcatcctcgacgacacgatggtgtacctggcgatcaacaaaccgcgcggcatgcactcg
acgatgtcggacgaccgcggcagaccgtgcgtgggtgatctggtcgaacatcgcgtgcgc
ggcaacaagaagctgttccacgtcgggcgactcgacgccgacaccgaggggttgctgttg
ctgaccaacgacggcgaactggcgcaccggctgatgcacccgtcgttcgaggtgcccaag
acctacgtcgcgacggtgatgggcaccgtgccgcgcggcctgggcaagaaactcaaggcc
ggtgtcgaattggacgacggcccagcacatgtcgacgatttcgcggtggtcgacacggtg
ccgggcaagaccatggtgaaggtcaccctgcacgaggggcgcaatcgcatcgtgcggcgc
ctgctggccgcggtggacttcccggtgcaggagttggtgcgtaccgagatcggctcggtg
tcgctgggggatcagcggccgggcagcatccgggcgctcacccgcaaggaagtcggcgag
ctttatcaggcggtgggtttgtga
DBGET
integrated database retrieval system
