Mycolicibacterium smegmatis INHR1: LI99_22225
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Entry
LI99_22225 CDS
T03409
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
msn
Mycolicibacterium smegmatis INHR1
Pathway
msn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LI99_22225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msn03400
]
LI99_22225
DNA repair and recombination proteins [BR:
msn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LI99_22225
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LI99_22225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
DUF3724
Motif
Other DBs
NCBI-ProteinID:
AIU16189
UniProt:
A0A653FMD7
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Position
complement(4571750..4572592)
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AA seq
280 aa
AA seq
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MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ
LHPGRNLDIVTQVQAIDAFAADIVSDYGRYTTACAMLETAERLAGEERAPMPDLHRLTVA
ALRAIADGRRARELVLDSYLLRAMAIAGWAPALTECARCAAPGPHRAFHVAAGGSVCVHC
RPSGSSTPPQAVLELMSALHDGDWEYAESSTPPHRSQASGLIAAHLQWHLERQLRTLPLV
ERGYRVDRTVAEQRAALVRQDMAHGNHTGQEDLPATASGA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtaccgtgaccgggcggtggtactgcgtcagcacaagcttggcgaggccgac
cggatcgtcaccctgctcacgcgcgaccacgggttggtccgcgcggtggccaagggtgtt
cgccgtacccgcagcaagttcggcgcgcggctcgaaccgtttgctcatatcgatgtgcag
ttgcacccgggccgcaatctcgacatcgtcacccaggtgcaggccatcgacgccttcgcc
gccgacatcgtcagtgactacgggcggtacaccaccgcgtgcgcgatgctcgagaccgcc
gagcggttggccggtgaggaacgcgcaccgatgcccgacctgcaccggttgaccgtggcg
gcgctgcgggcgatcgccgacggcaggcgggcccgtgaactggtgctcgactcctatctg
ctgcgggcgatggccatcgcgggctgggcgcccgcgctgaccgagtgcgcgcgctgcgcc
gcgccggggccgcaccgcgcgttccacgtcgccgcgggcggcagtgtgtgcgtgcactgc
aggcccagcgggtcgagcacgccgccgcaggccgtcctggaattgatgtcggcgctgcac
gacggcgactgggagtacgccgagtcctcgaccccgccacatcgcagccaggccagcggg
ctcatcgccgcgcacctgcagtggcatctggagcgtcaactgcgcacattgcctctggtc
gagcgcgggtaccgcgtcgacaggacggtcgccgagcaacgcgcagcgctggtcaggcag
gatatggcgcatggcaaccacacggggcaagaagacctacccgcaactgcctccggcgcc
tga
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