Mycolicibacterium gilvum Spyr1: Mspyr1_20140
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Entry
Mspyr1_20140 CDS
T01376
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mspyr1_20140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_20140
Enzymes [BR:
msp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Mspyr1_20140
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mspyr1_20140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ADT98671
UniProt:
E6TD19
LinkDB
All DBs
Position
2058392..2059186
Genome browser
AA seq
264 aa
AA seq
DB search
MPEGHTLHRLARQHQRRFGRAPVIVSSPQGRFVDGATAVNGRVLKKATAWGKHLFHHYDG
GRVVHVHLGLYGSFTEWPLPPLLPVGQVRMRMVGTEYGADLRGPTVCEVIDEPEIADIVA
RLGPDPLRPDADPSLAWRRINKSRRPIGALLMDQSVIAGIGNVYRSELLFRHRTDPFRPG
TSVTANEFDALWTDLVALMKVGVRRGKIVVVLPEHDHGAPSYREGRPRTYVYRRAGDPCR
VCSTPVRTVEMEARNLFWCPNCQS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggacacacgctgcaccggttggcgcggcaacaccagcgtcgattcggccgc
gcgccggtgatcgtgtcgagcccgcagggccgcttcgtcgacggagcgaccgccgtcaac
ggccgtgtgctgaagaaggcgaccgcgtggggtaagcacctgttccaccactacgacggc
ggccgggtcgtccacgtccacctcggtctgtacggttcgttcaccgaatggccgttaccg
ccgctgctgcccgtcggtcaggtgcggatgcggatggtgggcaccgagtacggcgccgac
ctgcgcggccccacggtctgcgaggtcatcgacgaacccgagatcgccgacatcgtggca
cgactcgggcccgacccgctgcgtcccgacgccgatccgtccctggcctggcgccggatc
aacaagtcgcgcagaccgatcggcgccctgctgatggaccagagcgtgatcgccggcatc
gggaacgtctatcgcagcgaactgctcttccggcaccgcacggacccgttccgccccgga
acgtcggtcaccgccaacgaattcgacgccctgtggaccgatctcgtcgcactgatgaag
gtcggggtgcggcgcggcaagatcgtcgtggtgcttcccgaacacgaccacggcgcgccg
tcctaccgcgagggacggccccgcacctacgtctaccgacgggccggcgacccctgccgg
gtgtgctcgacgccggtgcgcaccgtggagatggaggcgcgcaacctgttctggtgcccg
aactgtcagagctga
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