Mycolicibacterium gilvum Spyr1: Mspyr1_45110
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Entry
Mspyr1_45110 CDS
T01376
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mspyr1_45110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_45110
Enzymes [BR:
msp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Mspyr1_45110
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Mspyr1_45110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADU01066
UniProt:
E6TF20
LinkDB
All DBs
Position
complement(4665905..4666657)
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AA seq
250 aa
AA seq
DB search
MLIGSHVHGDDPLAAAEADGADVVQFFLGNPQSWKKPPPRDDADVLKAASMPIYVHAPYL
INVASANNRVRIPSRKILQDTCDAASDIGATAVIVHGGHADDNDMDAGFERWVKALASLK
TDVPVYLENTAGGDHAMARHFDTIARLWDHIGDMGIGFCLDTCHAWAAGEALIDAVERIK
GITGRIDLVHCNDSRDAAGSGADRHANFGTGQIDPQLLVAVVTAAGAPVICETSDDGRKD
DIAFLREHVS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcggttcccatgttcacggcgatgaccccctggccgcggcagaggcggacggc
gctgacgtcgtccagttcttcctcggcaatccgcagagttggaagaagccgccgccgcgc
gacgacgctgacgtgctgaaagcggcatcgatgccgatctacgtacatgctccgtatctc
atcaatgtcgcctcggcgaacaatcgggtgcggatcccatcccgaaagatcttgcaggac
acctgcgatgccgcctcggacatcggcgccactgcggtgatcgtgcacggcggtcatgcc
gacgacaacgacatggacgccgggttcgagcgctgggtgaaggcgctggcgagcctcaag
accgacgtccccgtctatctggagaacaccgcgggtggcgaccacgcgatggcacgccac
ttcgacacgatcgcgcggctgtgggaccacatcggggacatgggcatcggattctgtctc
gacacctgccacgcctgggccgcgggggaggcgctgatcgatgcggtcgagcggatcaag
ggcatcacgggccggatcgatctcgtccactgcaacgattcgcgtgacgccgcgggatcg
ggcgcggatcggcacgcgaatttcgggacggggcagatcgacccgcaactgctcgttgct
gtggtcaccgccgcgggcgcgccggtgatctgcgagacgtcggacgacggccgcaaggac
gacatcgcgtttctgcgggagcacgtcagctag
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