Methanobacterium subterraneum: BK009_09040
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Entry
BK009_09040 CDS
T05275
Name
(GenBank) replication protein A
KO
K07466
replication factor A1
Organism
msub
Methanobacterium subterraneum
Pathway
msub03030
DNA replication
msub03420
Nucleotide excision repair
msub03430
Mismatch repair
msub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BK009_09040
03420 Nucleotide excision repair
BK009_09040
03430 Mismatch repair
BK009_09040
03440 Homologous recombination
BK009_09040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msub03000
]
BK009_09040
03032 DNA replication proteins [BR:
msub03032
]
BK009_09040
03400 DNA repair and recombination proteins [BR:
msub03400
]
BK009_09040
Transcription factors [BR:
msub03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
BK009_09040
DNA replication proteins [BR:
msub03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
BK009_09040
DNA repair and recombination proteins [BR:
msub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
BK009_09040
MMR (mismatch excision repair)
BK009_09040
DSBR (double strand breaks repair)
HR (homologous recombination)
BK009_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Rep_fac-A_C
Ssb-like_OB
POT1
HROB
DUF5088
zinc-ribbons_6
DUF3127
DZR_2
Prok-RING_1
DZR
Motif
Other DBs
NCBI-ProteinID:
AUB60806
UniProt:
A0A2H4VRV8
LinkDB
All DBs
Position
1856336..1858711
Genome browser
AA seq
791 aa
AA seq
DB search
MREMSQEIKDEYEKIKDKISYEEFLKKMEEYKKENADVSFIDDISIAHMVVGDYITEKNE
PTEEVKDFWKIKDLESGTQHINLVGRVMSISNVKKFTSKKGREGKLANLILADETGRIRV
VFWTENIKLMDKFQEGDVVRINDVEVKQGFREDETHLNIQSSLEKLDPKDYPNLPPYNDK
ITPLSEVKGDAEVNVIARIIRIPRVRSFDRNGRDGKVVSLELQDKSGSMQFTLWNKDTNL
IDDLDLKEGDAIQIMGAQSRVRNGEISLSHSWIGRIIKGNFDVPEYHEDILKIGDAHEMR
NVTLVGLVSKVYDTITFERDDGSTGKVKSMELEDETGAIRVTLWNEDTEIDVKKGDILKI
IGGNIEFDDYSGTNYRLNTNWNTKFIINPVIDQEMKDALKEVGKYLKPMKIGDLNKIEDD
GEEVDIIGRVVNLYEPNEFQRDDGTAGQVRTAEIADDSGMVRVSLWDTKAEHPLKEGDAL
KIENARTRLGDYQVDLSVGRTSRLIEPTEDEIKDLPSLKDVESMIYQSKKITELAEGDRD
VSIFGRILSMGEPTQFTKSDGSSGVVRSMEIADDTGVVRASLWDDQANTAFKEGEAVKIE
NPRVSLRNDRIELSVGRTTLISKPNEEEASVPSLDAIEGKLYPPKNIGDIEEGDQSIKVT
GEVVDIRGNKILFEMCPNCNKRVNWVDDAYICDICGEEIKKPNMLMIISLMLEDDTGTIS
ITFFRKAAEEVLGITTAQAEEIIAATGDEGSLEEKVGDLVGRQITVIADASFDEYNEEVR
LNTRKMVDVKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatgagccaagagataaaggatgaatatgagaaaattaaggataaaatctca
tacgaagaattcttaaaaaagatggaagaatataagaaagaaaacgctgatgtaagcttt
attgacgatattagcatagcccatatggtagtaggggactatattactgaaaaaaatgaa
cccacagaagaagtgaaagatttctggaaaataaaagatttggaaagtggtacccagcac
ataaatcttgtggggcgggtaatgagtatttccaatgttaagaaattcaccagtaaaaaa
ggtagagagggaaaactagcaaatctgattctcgcagatgaaactggcagaataagggtt
gttttttggactgaaaatatcaaactaatggataaattccaggaaggcgatgtggttcgg
atcaatgatgttgaagtgaaacagggtttccgggaggatgaaacccacctgaacatccaa
tcatccttggaaaaattggatcctaaggattaccctaatttacccccatataacgataaa
ataactcctttaagtgaggttaaaggagatgcggaggtaaatgttattgcccgtatcatc
cggatcccccgagtaagatccttcgatcgtaatgggagagatggtaaagtagtctccctg
gaactgcaggacaagagtggtagcatgcagttcaccctctggaacaaagacaccaacctc
attgatgatctggatctaaaggaaggagatgccatccagataatgggagcccaaagcaga
gtccgcaatggagaaatatccctaagtcactcctggattgggagaataataaaaggaaac
tttgacgttccagaataccatgaagatattctcaaaatcggagacgcccatgaaatgcga
aatgttaccctcgtcggcctggttagtaaggtctacgataccataaccttcgaacgagac
gatggaagcactggtaaagtgaaatcaatggaattagaggatgaaactggagccattagg
gttaccctgtggaacgaggacactgaaatcgatgttaaaaagggagatatcctgaaaatc
attggaggtaacattgaattcgatgattattccggcaccaactataggttaaacaccaac
tggaacactaaattcatcatcaacccagtaatagaccaggaaatgaaagatgcactgaaa
gaggttggcaaatatcttaaaccaatgaaaatcggtgatcttaataagattgaggatgat
ggtgaagaagtggatatcattggacgtgtggttaacctctacgagcctaacgaatttcag
cgtgacgatggcaccgctggtcaggtgagaactgcagaaattgccgatgactcgggaatg
gtgagggtttccctatgggacactaaagccgaacatccacttaaagagggagatgccctg
aaaattgagaacgcacgcacccgtctgggagattaccaggtggatctcagtgttggtaga
acttcccgactaattgaacccactgaagatgagataaaagacttaccctccctaaaagat
gtggaatcaatgatctaccagagtaaaaagatcaccgagttggcagaaggagacagggat
gttagcattttcggccgaattctaagtatgggagaaccaacccagttcaccaaaagtgac
ggcagctccggcgtggttcgttccatggagattgccgacgacactggagtggtaagagct
tccctctgggatgatcaggccaatacagcctttaaagaaggtgaagctgttaaaatcgaa
aacccccgagttagtctgagaaatgaccgtatagaactcagtgtaggtagaaccaccctc
attagtaaacccaatgaagaagaagcatctgttcccagtttggacgcgatagaaggaaaa
ctctaccctcccaaaaatattggagacattgaggagggagatcagagcatcaaggtgact
ggagaagtggtggatatccggggtaacaagatactctttgaaatgtgccccaactgtaac
aaaagagttaactgggttgacgatgcttatatctgcgatatttgtggtgaagaaatcaaa
aaaccaaatatgctgatgatcatcagtctcatgttagaggatgacaccggaaccataagt
atcaccttcttccgtaaagccgccgaggaagttctgggcatcaccactgcccaagctgag
gaaatcatagctgcaacaggcgatgaaggatccctggaagaaaaagttggtgatctggtt
ggtaggcagatcacggtgatcgccgatgccagcttcgacgaatacaatgaggaagtgcgt
ttaaacaccaggaaaatggtggatgttaaactttaa
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