Allomeiothermus silvanus: Mesil_3007
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Entry
Mesil_3007 CDS
T01246
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msv
Allomeiothermus silvanus
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msv03016
]
Mesil_3007
Enzymes [BR:
msv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mesil_3007
Transfer RNA biogenesis [BR:
msv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mesil_3007
Prokaryotic type
Mesil_3007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADH64845
UniProt:
D7BDM5
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All DBs
Position
3053123..3054091
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AA seq
322 aa
AA seq
DB search
MALFAVDKPLGITSHDVVDAARRRLGTRRVGHTGTLDPLATGVLILASNSSTKLVPFLSA
EDKEYLAWVSFGATTETLDAEGPVTAEAPVRFSKKDLETTLPHFLSLTEQVPPAYSAVKI
GGVKAYEAARKGESLELTPRPVKYLEVTLLAFEPAPKTYRIGPSPNGWEITPVKGRQAPG
DAGTQRGRLVQLPRALGTYPTAVIRLVVGSGTYVRAFARDLGELLGTKAFLSGLVRTRVG
RVGLERCVPLEKIDPEHPLEETQALSFPLVQLSHAEVKRVLEGVPLPIPAQGYVALVDNR
RQLIAIAEGDGFKLKIKRVFKK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccttattcgccgtggacaaaccgctcggcatcacctctcacgacgtggtggacgct
gcccgcaggcgccttggaacccgccgggtggggcacaccggaaccctcgacccactggcg
acgggggtgctaatcctggcgagcaacagttcgaccaagctggttccttttctctccgct
gaagataaggagtacctggcctgggtctcgtttggtgcgaccactgaaacccttgacgcc
gaaggcccggttacggcggaggccccggtgcggttcagcaaaaaagacctcgagaccacc
ctcccacacttccttagcctcaccgagcaggtaccccccgcgtattcggcggtcaagata
ggaggggtcaaggcgtacgaagccgcccgaaagggagagagcctggaactcacccccagg
ccggtcaagtacctcgaagttaccctcctggccttcgaacctgcccccaaaacctaccgc
atcggcccctcaccgaacggttgggagatcaccccagtgaaaggccgacaggcccccggc
gatgccggtactcagcggggccgcctggtccagcttcccagggcactcgggacgtacccc
accgcggtgattcgtttggtggtgggtagcggaacctacgtgcgggctttcgcccgtgat
ctgggagaacttctgggtacgaaggccttcttatcagggttggtacgaacccgggtgggc
cgggtggggcttgagcgctgcgtgcccctggagaaaattgacccggagcaccccctagag
gagacccaggccctctccttcccgctggtacaactctctcatgccgaggtcaagcgggtg
ctcgagggtgttccgctcccaatcccggcccaagggtacgtggccctagtagataaccgc
cgtcagctcatcgccatcgccgagggggatggcttcaagctcaagatcaagcgggtattc
aagaagtag
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integrated database retrieval system
