Microbulbifer thermotolerans: A3224_08670
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Entry
A3224_08670 CDS
T04393
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mthd
Microbulbifer thermotolerans
Brite
KEGG Orthology (KO) [BR:
mthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mthd03032
]
A3224_08670
03400 DNA repair and recombination proteins [BR:
mthd03400
]
A3224_08670
Enzymes [BR:
mthd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A3224_08670
DNA replication proteins [BR:
mthd03032
]
Prokaryotic type
DNA Topoisomerases
A3224_08670
DNA repair and recombination proteins [BR:
mthd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3224_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AMX02646
UniProt:
A0A143HMC1
LinkDB
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Position
complement(2056332..2059001)
Genome browser
AA seq
889 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHIRDLPSGGKQAVDPKERARRAAETRKL
SPEAKEAYKRKKNREQLIKRMGIDPDHNWAAHYEILPGKEKVVTELRKLAAEADHIYLAT
DLDREGEAIAWHLREAIGGDDERYRRVVFNEITKSAIREAFQDPGRLNMNRVNAQQARRF
LDRIVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFVPEEYWTINADTETTR
AEALRLEVKKQAGENFRPTNEAQASAAAQALQASDFVVSARDDKPTSSKPSAPFITSTLQ
QMASNRLGFSVKKTMMLAQRLYEAGHITYMRTDSTNLSAEAVESVREFIGEQYGDRYLPE
RPNVYSSKEGAQEAHEAIRPSDVRVQPNMLPGMERDAERLYNLIWQQFVACQMTPAQFTS
TSIVVSAGDFELRARGRVIRFDGFMKVAPPAGKKDEDLVLPDVKVGEKLALKKLDPKQHF
TKPPARYSEAALVKELEKRGIGRPSTYASIISTIQERGYVRLENRRFYAEKMGDIVTDRL
NESFQNLMDYGFTANLEESLDAVAEGEKGWKELLDDFYQDFSARLEKAQAAEGGMRRNTP
TDTDIECSKCGRHMQIRTGSTGVFLGCSGYALPPKERCTNTMNLVPGDEAVDADKDEEAE
SRLLREKRRCPKCGTAMDSYLLDEHRKLHICGNNPDCPGYEVEQGTFKIKGYDGPVIECD
KCGSDMQLKSGRFGKYFGCTNESCKNTRKLLKNGQPAPPKMDPVPMPELPCQKVDDHYIL
RDGATGLFLAASQFPKNRETRAPLVKELLPHKDEIDPKYSFLFSAPVEDDEGRDTVVRFS
RKTQEQYVQSEENGKATGWRAFYRDGKWQIDAGKAKRAPARKKAMAKSK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactggtcattgtcgaatcaccggccaaagcgaaaaccatcaacaaatac
ctcggcaaggacttcgtggttaagtccagcgtcggccatattcgcgatttacccagcggt
gggaaacaggcggtggatcccaaggagcgcgctcgccgggctgcggagacgcgcaaactc
tcccccgaggccaaggaggcctacaagcgcaagaaaaaccgcgagcaactgattaagcgc
atgggcatagacccggaccacaactgggcagcccactatgaaatcttgcccggcaaggaa
aaggtggtcactgaattgcgcaagcttgccgctgaggcggatcacatctacctggccacg
gacttggaccgcgagggagaggccattgcctggcatctgcgcgaggccatcggcggcgat
gacgaacggtatcgccgagtggtgttcaacgagattaccaaatctgcgatccgggaggcc
ttccaggatccgggccgcctgaatatgaaccgtgtaaacgctcagcaggcgcggcgcttt
ttggaccgcattgtcggctacatggtatcgccgcttctgtgggagaaggttgcccgcggt
ctctccgccgggcgggtgcagtcagtggcggtgcgtttggtggtggagcgcgaacgcgag
atccgcgcatttgttccggaagaatactggacaattaacgccgacacagagaccactcgg
gcagaagcgctccgcctggaggtaaaaaagcaggccggggaaaatttccgtccgaccaat
gaggctcaggctagcgctgcggcccaggccctgcaggccagtgacttcgtcgtcagcgca
agggacgacaagccgaccagctccaagccttcggcaccctttattacctccacactgcag
caaatggccagtaaccgcctggggttcagtgtcaagaaaaccatgatgttggcgcagcgc
ctctacgaggcgggccacatcacctatatgcgtaccgattccacgaatctgagtgcagag
gcggtggaatccgttcgcgagtttattggcgagcagtacggtgacagatatctgccggag
cgccccaatgtatacagcagcaaggagggggctcaggaagcgcacgaggcgatacggccg
tcggatgtgcgtgtgcagccgaatatgctgcctggcatggaacgggatgccgagcggcta
tacaacttgatctggcagcagttcgtggcttgccaaatgaccccagcccagttcacctcc
acgtcgatcgtggtcagtgccggggactttgagcttcgcgctcgcggtcgagtgatccgc
ttcgacggctttatgaaagtggcaccaccggctggcaagaaagatgaagatctggtgttg
ccggacgtaaaagttggcgaaaagctggcgctgaaaaagctggatccaaaacagcacttt
acaaaaccgccggcgcgatacagtgaggcggcgttggtaaaagagctggaaaagcgcggt
atcggccgtccttccacctacgcatccatcatttccacaatccaggagcgaggctatgta
cgcttggagaaccgccgcttctacgctgaaaagatgggggacatagtcaccgaccggctg
aacgaaagcttccagaatctgatggattacggcttcaccgccaacctggaagaatctctg
gacgctgtcgcagagggcgagaaggggtggaaggagttgctcgacgacttttaccaggat
ttctccgcacggctggaaaaagcccaggcggcagagggaggaatgcgccgcaacacgcca
acagacacagatattgagtgcagcaaatgcggccgccacatgcagattcgaactggctcc
accggggtatttctcggctgttccggctatgcattgccgcccaaggagcgttgcacgaac
accatgaacctagtgcccggtgacgaggcggtggatgcggacaaggatgaagaggccgaa
tcccgtctgttgcgtgaaaagcgccggtgtcccaagtgcggtaccgccatggacagctat
ctgttggacgagcaccgcaagctgcatatctgcggcaacaacccggactgccccggctat
gaagttgagcagggcacattcaaaatcaagggctacgatggccccgtcattgagtgcgat
aagtgcggttcggatatgcagttgaaatccggccgttttggcaagtattttggctgtacc
aatgaatcctgcaaaaacacccgcaagctgcttaaaaacggtcagccagcgccgccgaaa
atggatccggtacccatgccggaacttccatgtcaaaaggtggacgaccactatatcttg
cgtgacggcgccaccggtctattcttggccgccagtcagtttccgaaaaaccgcgagacc
cgtgcgcctctggtaaaggaactgctgccgcacaaggatgagatagatccgaagtatagc
tttctgttttccgcgccagtcgaagatgacgaagggcgcgatacggtagtgcgcttcagc
cgcaaaacccaggagcagtatgtgcaatccgaagaaaatggcaaagccacgggatggcgc
gccttctaccgcgatggcaagtggcagatagacgcaggtaaagccaagcgcgcgcccgcg
cgcaaaaaggcgatggcgaaaagcaaatga
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