KEGG   Methanosarcina thermophila CHTI-55: MSTHC_1919
Entry
MSTHC_1919        CDS       T03891                                 
Name
(GenBank) Putative ski2-type helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mthe  Methanosarcina thermophila CHTI-55
Brite
KEGG Orthology (KO) [BR:mthe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mthe03400]
    MSTHC_1919
Enzymes [BR:mthe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MSTHC_1919
    5.6.2.6  RNA 3'-5' helicase
     MSTHC_1919
DNA repair and recombination proteins [BR:mthe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MSTHC_1919
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH DUF3600 T4SS-DNA_transf FAT AAA_25 Zn-ribbon_8
Other DBs
NCBI-ProteinID: AKB16237
UniProt: A0A0E3NG38
LinkDB
Position
2369680..2372547
AA seq 955 aa
MTFHNSFNFFHPKIQEALKTLGFTKPTEPQERAFPHIMDGKHTLLIAPTGSGKTESAVLP
VFNSILKKKPEARRGISALYITPLRALNRDMLSRIEILGKLLDIKVQVRHGDTPQSERQR
QSRNPPDMLITTPETLQAMFTGSRLRQNLETVTHVVIDEIHELAGSKRGTQLAVGLERLV
EISGEFQRIGLSATVGNPWEIAKFLAGNGRDFTVIEVSLLKLLEFDVVNPQISEGGEIQE
KEVLEIAKTVGCEPEFVSHLLCIRKVVENSQSTLIFVNTRQSAEALAAGFRKLGASIGVH
HGSLSFEARVEAEEAFKSGALKGLICTSSMELGIDIGNVDRVVQYGSPRQVSRLLQRVGR
AGHKLHAISRGTIISIEADDTAESMVITKAALEGRVEEISPHVKSLDVVANQLAGMAMDF
GEVGIDKILKILRRTYPFRDLQIEELQGVVDQIGDYKLVWYEKGSRVLKRRRKSWEYYYE
NLSMIPDEKKYEIYDIVSGKSVGVLDEAFVVNFAEPGAVFITKGCMWRVVEMPGQEQGKD
RIKVEPVEGMGEVPSWSGEEIPVPFEVAQDVGKLRAEIAAFIRDGLDDETIAVQLQAKYP
VAKNAVLGVIRLVREHIEGGFPLPDADTIVIEDEGDAVTLNACFGHNTNGTLARVLTSLL
SARFGSSVAQEVDPYRIRLTLPRRVGPVQIRDMLLSLRPEHVEPIIEMTLKNTTLMKWKM
VHVARKFGALSRDIDYDRISMKKLLEIYQGSSMYDEVIREIFHDLLDVPRAKEVLTKLAA
GEISVEVSPPTPIGSAGFSMKKDLVAPEKADRSIVLALKERIMNDRIVLFCTNCKKWTSR
RQVKSVPEEILCPVCNSQMIAALKPWEEEEINLVKKQAKNVKVTPEEKKRIQRVYRNASI
VRSQGKKAVIALASRGIGPETASRVIEKMRVDEEAFYRDILVAERNYVKTKKFWE
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgacatttcataacagttttaacttctttcatccaaagattcaggaagcccttaagacc
cttggttttacaaagcccacagagccccaggaaagggcttttcctcatataatggacggg
aagcacacccttttaatagctccaacgggttcaggcaagaccgaatcagctgtgctgccc
gtttttaacagtattctgaaaaagaaacccgaagccagaaggggaatttccgccctttat
ataaccccgttgagggcgcttaacagggatatgctttctcgcatagaaatcctcgggaaa
ttgctcgatatcaaagtccaggtccggcatggggatactccgcagagtgaaaggcagcgc
cagtcaagaaatcctcctgatatgctgatcacgacccctgagaccttgcaggctatgttt
actggctcccgcctgcggcagaaccttgagaccgtgactcatgtcgtgatagatgaaatc
catgagcttgcaggctcgaaacgaggaactcaactggctgtaggtcttgagaggcttgtg
gaaatctccggggagttccagagaatcggactttccgctacagtcgggaacccctgggaa
attgctaaatttctggcaggtaatggaagagattttactgtgattgaggtatccctgctg
aaattgcttgagtttgatgttgtcaatcctcagatctcagaaggcggggagatacaggaa
aaagaagtcctggaaattgcaaaaacggtaggttgtgagcctgaatttgtctctcacctg
ctctgcatcaggaaagttgtcgaaaatagccagtccaccctgatttttgtaaatacgcgg
cagagtgccgaggcgctcgcggctggttttcggaagcttggagcatctataggggtgcac
catggttcgctctcttttgaagcccgtgttgaagctgaagaggctttcaaatctggagct
ttgaaaggacttatctgcacttcttcaatggaactgggtatagatatcggcaatgttgac
cgcgtggttcagtacgggtctccgcggcaggtttcaaggttactccagagagtgggaaga
gcagggcataagctgcatgcaatttcacggggtactattatctcgatagaagcggatgat
actgcggaaagtatggtgataacaaaagctgcactggaaggcagggttgaagaaatctcc
ccgcacgtaaaatcccttgatgtcgtagcaaatcagcttgcaggcatggctatggatttt
ggggaagtcggaattgataagattcttaaaattctcaggcggacctacccattccgggat
ttgcaaattgaagagttacagggggttgtggaccagataggggattataaactggtctgg
tatgaaaaaggctctcgcgtgcttaaaaggcgcaggaaaagctgggaatactattatgaa
aacctttccatgatcccggacgaaaagaagtacgagatttacgacattgtgagtggaaaa
tcggttggcgtgctggatgaggcttttgtcgtgaactttgcagagcctggcgctgttttc
ataacaaaaggctgcatgtggcgggtcgttgaaatgcctggacaggaacagggaaaagac
agaatcaaagtagagcctgtagaaggtatgggtgaggttccgagctggtctggcgaagaa
attcctgtgccttttgaagtagcccaggacgtaggaaagctcagggcagaaattgcagcc
tttattcgtgatggtcttgatgatgaaactattgccgtacagcttcaggcaaaatacccc
gtggcaaagaatgccgtgcttggtgtgatccgccttgtgcgcgaacatatagagggaggc
tttccccttcccgatgcagatacaatcgtgatcgaagacgaaggcgatgctgtaaccctg
aacgcctgttttggtcataacacaaacggcactcttgcccgagttttgacttcacttctt
tcagcccgcttcggcagcagtgtcgctcaggaagtcgacccctacaggataaggttaact
cttccgcgtcgggtaggcccggtccagatccgggacatgctgctctccctccgccccgag
cacgtcgagccgataatagagatgaccctgaaaaacacaaccctgatgaaatggaaaatg
gtccacgttgcccggaaattcggagccctctcccgcgacatcgactacgaccggatcagc
atgaaaaaactccttgaaatctaccagggctcttcaatgtacgacgaagtcatccgcgaa
atcttccacgaccttcttgacgtccccagggcaaaagaagtccttacgaaactcgctgcc
ggtgaaatctcagtcgaagtctcccctccgaccccgataggatcagccggcttttccatg
aaaaaagaccttgtcgccccggaaaaagccgaccgttcaatcgtcctcgccctgaaagag
cggattatgaatgaccgaatcgttctattctgtacgaactgcaagaaatggacctcccgc
cgtcaggtcaaaagcgtccctgaagaaatcctctgcccggtttgcaactcccagatgatt
gcagccctcaaaccctgggaagaggaggaaatcaacctcgtcaaaaaacaggcaaaaaat
gtcaaagtcacccccgaagaaaagaaacgaatacagcgcgtctacagaaacgctagcata
gtccgctcccaggggaagaaagcggttattgcgcttgccagccggggaatagggcctgaa
acggcgtcaagggtgattgaaaagatgagggtggacgaagaggcgttttacagggatatt
ctggttgcagagagaaattatgtgaagacgaagaagttttgggaatga

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