Methanosarcina thermophila CHTI-55: MSTHC_2022
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Entry
MSTHC_2022 CDS
T03891
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mthe
Methanosarcina thermophila CHTI-55
Pathway
mthe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mthe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSTHC_2022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mthe02000
]
MSTHC_2022
Transporters [BR:
mthe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSTHC_2022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Pro_isomerase
Motif
Other DBs
NCBI-ProteinID:
AKB16340
UniProt:
A0A0E3NEF0
LinkDB
All DBs
Position
2488818..2490473
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AA seq
551 aa
AA seq
DB search
MDRKRLLVLFSVLLIGLSLMTAGCTDQDSAQAGELAEIENTAEGSQAVDVVNLSGGDCGY
PQPFTIYPRGPGSSKVRMIFDSLLERDESGMIPWLAESWDVSPDGTEYTFHLREGVVWSD
GEPFTADDVKFTFDYEQEHVPISGGIEPGIVDSVQVLDPNTVKFVLSQPTSTFLYKLTSF
KIIPEHIYKNISDPVSFLDSKAVTGTGPFLLDEYNKEHGTYRFVANEKFWGPEVAVKSVE
FIPVSDSLIAFEQGKIDFASISPDTLDRFKSDPDIRIVQQPAFWGYQFYFNMKKCPELND
RRIRQAFAYAIDRDELVEKIARGAGKAGKMGILPEDHIWYNPDQPEYGYNPDKASALLEE
AGWSDTDGDGIRDKDGEKLSYILSLSSGEIRIGGLIKERLSEVGIDVQVKSLESKSRDAN
LKNGDFELLISGFGGWGQDADYLRTRYCDTDSQSSNSVSSGAAVYGYHNDTLNSLGALEL
QESDNNKRKEIICEMQALLANDVPAIPLYYTTSYDAWRISKYDGWMNMYDHHARTHSILS
YLERDGIAEKR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaaaaggttactggtgttattttctgttctcctgataggcttgagcttaatg
actgcgggctgtactgatcaggacagtgctcaggcaggagaactggctgagattgagaat
actgctgaagggtcacaggctgtggatgttgttaatctgagcggcggggattgtgggtat
cctcagccgtttacgatatatccgaggggaccggggtcgtcaaaggtcaggatgatcttt
gacagtctccttgagagggatgaaagcggtatgattccctggctggctgaaagctgggat
gtcagcccggatgggaccgaatatacattccatctccgtgaaggggttgtgtggagtgac
ggagagccttttacggcagatgatgttaagtttacttttgattatgagcaggagcatgtg
cctatctcgggcggaattgagccgggtattgtagatagtgtccaggtcttggaccccaac
actgtcaaattcgtactgagccagcctacttctacattcctttacaagctcacgagcttt
aaaataatacctgagcatatctacaaaaatatctcagatccggttagtttccttgactca
aaggcggtcacggggactggtccgtttcttcttgacgagtacaacaaagaacatgggacg
tatcgctttgtggcaaacgagaaattctgggggcctgaagttgccgttaagtccgtcgag
tttattccggtcagcgactcgttaatagcttttgagcagggcaaaatcgattttgcaagc
atatcccctgacactcttgataggttcaaatccgatcctgatataagaatagtccagcag
ccggccttctggggttaccagttctatttcaacatgaaaaaatgcccggaactcaatgac
cgcagaataaggcaagcttttgcttatgccattgaccgtgacgaactggtggaaaagatt
gcaagaggtgcaggaaaagccggcaagatgggcatactccctgaagaccatatctggtat
aaccctgaccagcctgagtatggctacaatccggataaagccagtgcactgcttgaagaa
gccggatggagtgatacggatggggatggaatacgtgataaggacggggaaaaactgtca
tacatattatctctcagcagtggcgaaatccgtattggtggacttataaaagagaggctg
agtgaggtgggaatcgacgtccaggtgaaatcccttgagagcaagtccagagatgccaat
ctaaagaacggagactttgagcttcttatcagcggttttgggggctggggacaggatgca
gattatcttcgcacaaggtattgtgacacagattcacagtcatcaaatagtgtgtcatcc
ggtgcagcagtatatggttaccacaatgataccctgaactcgcttggtgccctggagctg
caagaatctgacaataataagcggaaagaaataatatgcgagatgcaagccctgcttgct
aatgatgtgcctgcaataccgctctattatacaacgtcatacgatgcctggagaatctca
aaatatgacggctggatgaatatgtacgaccatcatgcaagaacacacagcattctttcg
tatcttgagagggatgggattgcagaaaaaagatga
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