KEGG   Mycolicibacterium thermoresistibile: 4412656_03803Help
Entry
4412656_03803     CDS       T05542                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mthn  Mycolicibacterium thermoresistibile
Pathway
mthn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mthn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    4412656_03803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mthn03400]
    4412656_03803
Enzymes [BR:mthn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     4412656_03803
DNA repair and recombination proteins [BR:mthn03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     4412656_03803
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S mRNA_cap_enzyme DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID: SNW19955
LinkDB All DBs
Position
1:complement(4021237..4023537)
Genome map
AA seq 766 aa AA seqDB search
MERYERVKLTNPDKVLYPASGTTKAEVFEYYIEIADAMLPHIAGRPVTRKRWPNGVHEAS
FFEKQLASSAPDWLARGTITHKSRTTTYPIIDTREGLAWIAQQAALEVHVPQWRFVAGGR
SGRDGKLTMGPATRIVFDLDPGEGVTMRELCRVAHEVRDLITDIGLDTFPLTSGSKGLHL
YVPLDEPISSQGASVLAKRVALQLEKAMPTLVTATMTKSVRTGKVFLDWSQNNAAKTTIA
PYSLRGREHPTVAAPRTWDEIDDPDLRHLTFTEVLDRVDRLGDLLAPMDADAPVADRLSS
YRSMRDPARTPEPVPKTVAATGDDNRFVIQEHHARRLHYDLRLERDGVLVSWAIPKNLPD
DPSVNHLAVHTEDHPLEYLTFHGEIPEGEYGGGKMLIWDTGTYEAEKFNDVGPDEDAEGG
EVIITLHGEKISGRYALIQTDGKNWLAHKMKDQKPRTEIRPEDFTPMLATHGSVARLSAE
THAFEGKWDGYRLLVHIDHGKLCLRSRSGRDVTKEFPTLQAMAADLADHQVVLDGEVVAL
DGSGVPSFGEMQNRARATHIEFWAFDILWLDGRSLLRAKHSDRRRVLLALAEKDGLIVPD
LLPGDTGAEALEYARERGFEGVVAKRHDSIYQPGRRSKAWIKDKIWNMQEVVIGGWRKGE
GGRSSGIGALVLGIPTEGGLQFVGRVGTGFTDKQLAELKQLLAPLETDESPFVDPLPRPD
AKGVTYVRPELVGEVRYSERTADNRLRQPSWRGLRPDKSPDEVRWE
NT seq 2301 nt NT seq  +upstreamnt  +downstreamnt
atggagcgctatgagcgggtgaaactcaccaaccccgacaaggtgctctacccggcctcg
ggcaccaccaaggccgaggtgttcgagtactacatcgagatcgccgacgcgatgctgccg
cacatcgccggtcgcccggtcacccgcaagcgctggcccaacggcgtgcacgaggcgtcg
ttcttcgagaagcagctcgcctcgtcggcgccggactggctggcccgcggcaccatcacc
cacaaatcccggaccaccacctatccgatcatcgacacccgcgaggggctggcctggatc
gcccagcaggccgcgctggaggtgcatgtcccgcagtggcggttcgtggcgggtgggcgc
agcgggcgcgacgggaagttgacgatggggccggccacccgcatcgtgttcgacctcgac
ccgggcgaaggggtcacgatgcgcgaactgtgccgggtggcccacgaggtgcgcgatctg
atcaccgacatcggcctcgacaccttcccgctgaccagcggcagcaagggcctgcacctg
tatgtgccactggacgagccgatcagttcgcagggtgcgtcggtgctggccaaacgggtc
gccctgcagttggagaaggccatgcccacgctggtcaccgcgacgatgaccaaaagcgtg
cgcaccggcaaggtgttcctggactggagtcagaacaacgccgccaagaccaccatcgcc
ccgtattcgctacgcggccgcgagcatccgaccgtcgccgcgccccgcacctgggacgag
atcgacgaccccgacctgcggcacctgaccttcaccgaggtgctggaccgggtcgaccgg
ctcggcgacctgctggccccgatggacgccgacgccccggtcgccgatcggctcagcagc
tatcgcagcatgcgggatccggccagaacacccgaacccgtcccgaaaaccgttgccgcg
acgggagacgacaaccgcttcgtgatccaggagcaccacgcgcgacggctgcactacgac
ctgcggctggaacgcgacggggtgctggtgagctgggcgatcccgaagaatctgcccgac
gacccgtcggtcaaccacctggccgtgcacaccgaggaccatccgctggaatatctgacc
ttccacggcgagatccccgaaggcgagtacggcggcggcaagatgctgatctgggacacc
ggcacctacgaggccgagaagttcaacgacgtcggcccggacgaggacgccgagggcggc
gaggtcatcatcaccctgcacggcgagaagatctccggacgttacgcgctcatccagacc
gacggcaagaactggttggcgcacaagatgaaggatcagaagccgcgcaccgagatacgg
cccgaggacttcacaccgatgctggccacccacggctcggtggcgcgcctctccgccgag
acgcatgccttcgaaggcaaatgggacggctaccggctgctggtccacatcgaccacggc
aagctgtgcctgcggtcgcgcagcggacgcgatgtcaccaaggagttcccgacgctgcag
gcgatggccgccgatctggccgaccaccaggtggtgctcgacggggaggtggtggcgctc
gacgggtccggggtgccgagcttcggtgagatgcagaaccgggcccgcgccacccacatc
gagttctgggcattcgacatcctgtggctggacggccgctccttgttgcgcgccaagcat
tccgaccgccgcagggtcctgctcgcgttggccgagaaggacggtctgatcgtgccggac
ctgttacccggcgacaccggagccgaggcgctggagtacgcgcgggaacgcggcttcgaa
ggcgtggtggccaagcggcacgactcgatctatcagccgggccggcgctcgaaagcgtgg
atcaaggacaagatctggaacatgcaggaggtggtgatcggcggctggcgcaagggcgag
ggcggccggtccagcggcatcggcgcgctggtgctgggcatccctaccgaaggaggactg
cagttcgtcggcagggtcggtaccggattcaccgacaagcaactggccgagctcaagcag
ttgctcgcaccgctggagaccgacgagagtccgttcgtcgacccgttgccgcgccccgac
gccaaaggggtgacgtacgtgcggccggagctggtcggcgaggtgcgctacagcgagcgc
accgccgacaaccggctgcgccaacccagttggcgcgggctgcgtccggacaagtcaccc
gatgaggtgaggtgggaatga

DBGET integrated database retrieval system