Thermothelomyces thermophilus: MYCTH_2304601
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Entry
MYCTH_2304601 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MYCTH_2304601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtm03400
]
MYCTH_2304601
Enzymes [BR:
mtm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MYCTH_2304601
DNA repair and recombination proteins [BR:
mtm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
MYCTH_2304601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
11507750
NCBI-ProteinID:
XP_003663124
JGI:
2304601
UniProt:
G2QBD6
LinkDB
All DBs
Position
3:complement(join(2639383..2642353,2642460..2642566))
Genome browser
AA seq
1025 aa
AA seq
DB search
MSSRNKRAKSPDVDAIEEDEKQYGSGSLSLAELDEHFPNRPRNHSKTPPFSHLFQHLFNP
LIECKPTTAGAAAGATRRTARGGAGGRGASSKLSYHEQRRHIVERFMSRWRAEVGPDFYP
AMRLILPDKDRDRGVYGLKENTIGKLLVKVMKIDRNSEDGYALMHWKLPGGHGGGGGGGG
GRFGGGAISTAGDFAGRCYEIVKKRQMRSEPGEFTIGDVNVMLDRLAAASGEAEQLPIFE
EFYQGMNAEELMWLVRIILKDMKVGATERTFLGLWHPDAEALFSVSSSLRRVCWELYDPE
FRLEQQETGVTLMSCFQPQLAQFQMTTTFAKLVANLGVTDENPEFWIEEKLDGERMQMHM
REDDSVPGGYRFAFWSRKAKDYTYLYGSGLEDNNSALTRHLKGAFDSGVRNLILDGEMIT
WDPEVDKIVPFGTLKTAALDQQKNPFHSGPRPLYRVFDILLLNDKSLTEYTLADRHRALE
RAVKGAPRRLEIHPYVSATSADEIEPLLRAVVAEASEGLVLKNPRSRYQLNSRNNDWIKV
KPEYMSEYGESLDLVVVGGYWGSGRRGGTLSSFLCGLRVSENFVRSGAAASREKCLSFCK
VGGGFKAEDYAEMRHHTEGKWREWDPASPPSEFVELGGGERLQYERPDVWIRPSESVVIS
VKAASFAPSDQFATGWTLRFPRFRKLRLDKAWDAGMDVDELEALRSKVKQEEKERKAMEM
ENRKRKPAKRQKRELVIAGAADLAGATADFLAVKKPKTDLFRGLDFCVLSEAVKPKKMSK
PDLEKLIKENGGRIHQTVEKGSGMIILADKNVVRVASLKKAGDADIVRPKWVFDCLEQSG
GEGYLLPFEEGHLLSATEEMRKLAEESTDQYGDSYARDVGVDELRDILEQMELPEEGSHF
DVDNFLDQLEEHGRGLDGLESFMFRRCRVHFALGEGVPESRALKLMNYVRFGNGEVVSDI
EDKRITHVVVVGGKGETSASERVVAADVRYKVSSRRAVPRVVSARWVEDCWREGTLVDEE
EYAPT
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcgaaacaagcgtgccaagtccccggacgtcgatgcgatcgaggaggatgag
aaacagtacggcagcggctccctcagtcttgcagagctcgacgagcactttcccaaccga
ccccgcaaccactccaagacaccacccttctcgcacctcttccagcatctgttcaatcct
ctgatagaatgcaagcccaccaccgccggcgctgcggcgggcgccacccggcggaccgcc
cgcggcggggccggaggccggggcgcctcctccaagctctcgtaccacgagcagcgccgc
cacattgtcgagcgcttcatgtcgcgctggcgcgccgaggtcggcccggatttctacccg
gccatgcgcctcatcctgccggacaaggaccgcgaccgcggcgtgtacgggctcaaggag
aacaccatcggcaagctgctcgtcaaggtcatgaagattgaccgcaactcggaggacggc
tacgcgctgatgcactggaagctccccggcggccacgggggcggcggcggcggcggcgga
gggaggttcggtggcggggcgatcagcacagccggggatttcgcgggcaggtgttacgag
attgtgaagaaacggcagatgaggagcgagcccggggagttcacgatcggggacgtgaat
gtgatgctggaccggctggccgcggcgagcggtgaggccgagcagctgcccatctttgag
gagttttaccagggaatgaatgccgaggagctgatgtggctggtgcgcatcatcctcaag
gatatgaaggttggcgcgaccgagaggacgttcctggggctgtggcatcccgacgccgag
gcgctcttcagcgtctcgtcgagcctgaggagggtctgctgggagttgtacgacccggag
tttcgcctcgagcagcaggagacgggtgtgacgctcatgtcgtgcttccagccccagctg
gcgcagttccagatgacgacgacatttgcgaagctggtggcgaacctgggagtcacggat
gagaaccccgagttctggatcgaggagaaactggacggcgagcggatgcagatgcacatg
cgggaggatgactcggtgccgggagggtacaggttcgccttctggtctcgcaaggccaag
gactacacctatctgtacggaagcgggctggaagataacaactcggccctcacccggcat
ttgaagggggcctttgacagcggcgtccgcaacctcatcttggacggcgagatgatcacc
tgggaccctgaagtcgacaagattgtgccctttggtaccctcaagactgccgccctggac
cagcagaaaaaccctttccacagcggcccacgcccgctctaccgcgtgtttgacatactt
ctcctcaacgacaagtcgctcaccgagtacacgctcgccgaccggcaccgggccctcgag
cgtgccgtcaagggggcgcctcgccgtctcgagattcacccgtacgtctcagccacgtcg
gccgacgagatcgagccgctccttcgcgccgttgtggccgaggcctcggagggactcgtg
ctcaagaacccgcgctcgcggtatcagctcaacagccgcaacaacgactggatcaaggtg
aagcccgagtacatgtccgagtacggcgagtcactcgacctggtcgtcgtcggcgggtac
tggggctcgggccgacgcggcggcacgctctcgagcttcctgtgcgggctacgcgtgagc
gaaaactttgtgcggtcgggcgccgcggcgagccgggagaaatgcctcagcttctgcaag
gtcggtggcgggttcaaggcggaggattacgccgagatgcggcaccacaccgagggcaag
tggagggagtgggacccggccagcccgccgtccgagttcgtcgagctgggcggcggcgaa
cggctgcagtacgagcgccccgacgtgtggatccgcccgagcgagtcggtcgtcatctcc
gtcaaggccgcgtcgttcgcgccgtcggaccagttcgccacgggctggaccttgcggttc
ccgcgcttccgcaagctgcggctggacaaggcgtgggacgccggcatggacgtggacgag
cttgaggcattgcggtccaaggtcaaacaggaggagaaggagcgcaaggcgatggagatg
gagaaccgtaaacgaaaaccggcaaagagacagaagagggagctggtcatcgccggcgct
gctgaccttgccggggccacggccgactttttggccgtgaagaaaccaaagaccgacctg
ttccgaggcttggatttttgcgtcttgtccgaggcggttaagccgaagaagatgagcaag
ccagacctggagaagctgatcaaggagaacggaggcaggatacaccagacagtggagaaa
ggctcgggcatgatcatcctggcggacaagaacgtcgtcagggtggcgagcctcaagaag
gcaggcgatgcggacattgtgcggccaaagtgggtgtttgactgtctcgagcagagcggc
ggggagggctatctgctcccgtttgaggaaggccatctcctttctgccaccgaggagatg
agaaagctcgccgaggagagtacggaccagtacggagacagctatgctcgggacgtgggc
gtcgatgagctgagagacatcctggaacagatggaactgcccgaagagggtagccacttt
gacgtcgacaacttcctcgatcagctggaggagcacggcaggggattggacgggctggag
agcttcatgttcaggaggtgccgggtgcactttgcgcttggggaaggagtgcccgagtct
agagcgctcaagctgatgaactacgtgcgatttggaaacggcgaggtggtgagtgatatc
gaagacaagaggattacgcacgtggttgttgtcggtgggaagggggaaacatccgcgtcc
gagagagtggtggcggcagatgtgaggtataaggtcagctcgaggagggcagtaccgagg
gttgtctctgcgaggtgggttgaggactgctggagagagggcaccctcgtggatgaggag
gaatatgcaccgacctag
DBGET
integrated database retrieval system
