Methanothrix thermoacetophila: Mthe_1672
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Entry
Mthe_1672 CDS
T00417
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp03022
Basal transcription factors
mtp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mthe_1672
09124 Replication and repair
03420 Nucleotide excision repair
Mthe_1672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtp03021
]
Mthe_1672
03400 DNA repair and recombination proteins [BR:
mtp03400
]
Mthe_1672
Enzymes [BR:
mtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mthe_1672
Transcription machinery [BR:
mtp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mthe_1672
DNA repair and recombination proteins [BR:
mtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mthe_1672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_16
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ABK15438
UniProt:
A0B9R4
LinkDB
All DBs
Position
complement(1815362..1817581)
Genome browser
AA seq
739 aa
AA seq
DB search
MCGHSRSRACAAESCSQAFISKKIHSEAVYLDYIPYPSLRPHQDEMLDAVYDVVSTGGHG
VLMIDAPTGSGKTSCISAALAAAPGKIVVAVRTVSQIGVYLDEINRIWSNTRHRPTVSYL
IGKQKACLLASEIWGESIYYACMRLREGSKNYMASRLERGHNDIYDPSRDEIPDEPPGER
TVCPHYLRSKEAFEINGKVYFRSSSAAVDAAERMSRRIVPVDALEKICGGVCPYEVMSLH
AKSSDVIILNYHHLFSPDFQDAIIQWLGLEADRMTVIVDEAHNLGDSVREMNTRVLTPRI
LELAEREINRFEKALGQAKLGEEHHDWRREGLSTARLLIPRIRRFIAAKEARSKDGEMLL
DGELFRQYVYDGIDDIDLALSYLSDVAVAIAEMKLAESDHETLYGDIQPSLATMVMFLRE
VEEAEHDSSYQRKIVTASSGERRWTRLEVTKIDPAPVIRRVVDNVNATLMLSGTLSPIDA
YELYCLGEQGRARKISLPNPFPQSNRLIIAAERATTQLSARENPDNRNLISGYISALIEE
VPGNVAVFFTSYPMMASYRDACARFARGAGKKVFTEPRSAEDVPQILEEFFRAGRSAGAV
LLGVSGGKLAEGIDYKGEALNGVAVVGLPLSVFDEIQKEVISYYTHKYGKKRGTLIAYTL
PAINRGLQAAGRVIRAESERGVILLCDSRFASMGLGGVRMYLPEWVQREMVLADPERCRL
LIRDKLREWGEFSARSENI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcggccattcccgatctcgagcatgcgcagcagaatcatgcagccaagcttttatc
tccaagaagattcacagtgaggctgtgtatctcgactacatcccctatccatcgctgcgc
ccacaccaggatgagatgctcgacgccgtctacgatgtcgtctccacaggcggccatggg
gttctgatgatagatgcgcccacaggctcaggaaagacgagctgcatatcagcggcactt
gcagccgcgccaggaaagatcgtggttgcggtcagaaccgtgagccagataggagtgtat
ctggatgagataaacaggatctggtctaacaccaggcacaggcccacagtctcatacctc
ataggaaagcagaaggcatgcctgctcgcatctgagatctggggggagagcatctactac
gcgtgcatgaggctgagagaaggctcgaagaactacatggcctccaggctggagagaggg
cataacgatatctacgatccgtccagggacgagataccggatgagcctcccggagagagg
accgtctgtccccattacctgaggagcaaagaggccttcgagatcaacgggaaggtctac
ttcaggtcctcatcagcagctgtggatgctgcagagaggatgagcaggaggatagtgcct
gtcgatgcccttgagaagatctgcggaggtgtctgcccgtatgaggttatgtcgctgcac
gcgaagagcagtgatgtcatcattttgaattaccatcacctcttcagcccggattttcag
gacgctataatccagtggctcggccttgaggcagaccgcatgacagtgatcgttgacgag
gcccacaaccttggcgactctgtcagggagatgaacaccagggtgctcacgcccaggatc
ttggagcttgcggagcgggagataaacaggttcgagaaggcgctgggccaggcgaaactc
ggtgaggagcatcacgactggcgcagggaggggctcagtacagccaggctgctaatacca
agaatcaggagattcatagccgcgaaggaggccagatcgaaggacggggagatgcttctc
gacggcgagctcttcaggcagtatgtgtacgatgggatcgacgatatagacctcgctctc
tcatatctgagcgatgtggctgttgcgatcgcggagatgaagcttgcagagagcgatcat
gaaaccctctacggggacatacagcccagcctcgccacgatggtcatgttcctgagagag
gttgaggaggccgagcacgattcatcgtaccagagaaagatcgtgacagcatcatcaggg
gagaggagatggactcgcctggaggtgacgaagatcgatcccgctcccgtgataagaaga
gtcgtcgataacgtcaatgcaaccctgatgctcagcggcaccctctcgcctattgatgca
tacgagctgtactgcctcggcgagcagggcagagccagaaagatttccctcccaaaccca
ttccctcagagcaaccgtttgatcatagcagcggagagagcgacgacacagctcagcgcg
agggagaacccggataacaggaacctgatatccggctacataagcgccctgatagaggag
gtgccggggaatgtagcggtattcttcacatcataccccatgatggcatcgtacagggat
gcgtgtgccagattcgcgcgcggcgctggcaaaaaagtcttcacagagccgcgatctgca
gaggatgtccctcagatccttgaggagttcttcagggctggcaggagcgcgggagctgtg
ctgctcggggtctcaggaggaaagctcgctgagggcatagactacaagggcgaggccctc
aatggggtggctgttgtcggtcttccactttcggtcttcgatgagatccagaaggaggtc
atctcttattacactcataagtacggcaagaaacggggtacgctgatagcgtataccctc
cctgcgatcaaccgcgggctccaggcagccgggagggtcataagggcggagagcgagagg
ggagtcatactcctctgcgacagcaggtttgcgtccatgggtctgggaggcgtcaggatg
tatctcccagagtgggttcagagggagatggtgctggcagatcctgagaggtgcaggctt
ctgataagagataagctgagggaatggggggagttttctgcgagatctgagaacatctga
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