KEGG   Microbacterium testaceum: MTES_0426
Entry
MTES_0426         CDS       T01423                                 
Symbol
rho
Name
(GenBank) transcription termination factor
  KO
K03628  transcription termination factor Rho
Organism
mts  Microbacterium testaceum
Pathway
mts03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mts00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MTES_0426 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mts03021]
    MTES_0426 (rho)
   03019 Messenger RNA biogenesis [BR:mts03019]
    MTES_0426 (rho)
Transcription machinery [BR:mts03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MTES_0426 (rho)
Messenger RNA biogenesis [BR:mts03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MTES_0426 (rho)
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind AAA_25 NACHT Spore_III_AA AAA_22 VWA_2 Mor eIF-3_zeta PIP5K
Other DBs
NCBI-ProteinID: BAJ73390
UniProt: E8NAW8
LinkDB
Position
complement(435209..437350)
AA seq 713 aa
MESISETQPVDAPEGAEIPAEELSAEAQGTDTDQAEAAVETPDAEGVDASDTEAAPADAA
QPEALFTDDTLTAEVPAVEEPAADTPAAEASTEPAAEPAADEPAVAEKPVKAPRKRAPRR
ATTASAKEKAAAEAAAAEAAASAEAEATPEAEAAPEAVVAPEATTPVTTAADVADDAAAT
EETPAVNEAEATPAEDAASVDAAAPEDAASEETASEDTASETASDAAETPATDDTADETP
ARGRGRNRSRNRNRNKPDAADKPEAQPATGGDEAEAPQQGGQRDGGSQNGQQAQQQGGTS
NRNRQRNKRRGPNTTGDEFDSEISEDDVLVPIAGILDVLDNYAFVRTTGYLPGPSDVYVS
LGQVKKYNLRKGDAVVGSIKQPRENEQSSRQKYNALVKVDSINGLSVDDAATRVEFNNLT
PLYPQERLRLETGPEKLTQRIIDLVAPVGKGQRGLIVAPPKAGKTIVLQQIANAIAHNNP
EVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDV
VVLLDSITRLGRAYNLSAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATAL
VETGSKMDDVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDEVKIT
WKLRRALAGLEPQQALEVVLGKLKETQSNVEFLVQMQKSIPAPSRGGDDNSIR
NT seq 2142 nt   +upstreamnt  +downstreamnt
gtggagtccatctccgagacccagcccgtcgacgcgcccgagggcgccgagatccccgcc
gaagagctttcggccgaggcgcagggcactgacaccgaccaggccgaagcggccgtcgag
accccggatgccgagggcgtagacgcctcggacaccgaggccgcgcctgcggacgccgcg
cagcccgaggcgttgttcaccgacgacaccctcaccgcagaggtgccggcggtggaagaa
cccgccgctgacacccccgccgccgaggcgtcgaccgagcccgccgcggagcctgctgcc
gacgagcccgctgtcgcggagaagcccgtcaaggccccgcgtaagcgtgcgccccgtcgc
gccaccaccgcgtcggccaaggagaaggcggctgccgaagccgccgctgcggaagccgct
gcttccgccgaggcagaagccactcccgaggccgaggccgctccggaggccgtcgtcgcc
cccgaggccacgacgcccgtgaccaccgccgccgacgtcgcggatgacgccgccgcgacg
gaggagacgccggccgtcaacgaggccgaagcaactcccgcggaggacgccgcttccgtt
gacgccgccgcgcccgaggacgccgcgagcgaggaaaccgcgagcgaggacaccgcgagc
gagaccgcttccgacgccgcggaaacccccgcgaccgacgacaccgccgacgagacgccg
gcccgtgggcgtggccgcaaccggtcacgcaaccgcaaccgcaacaagcccgacgccgcc
gacaagcccgaggcgcagcccgccacgggcggcgacgaggctgaggccccccagcagggc
ggtcagcgcgacggcggttcgcagaacggtcagcaggcgcagcagcagggcggaacgagc
aaccgcaaccgtcagcgcaacaagcgccgcggcccgaacacgacgggcgacgagttcgac
tccgagatcagcgaggacgacgttctcgtcccgatcgccggcatcctggacgtgctcgac
aactacgctttcgtgcgcaccaccggttacctgcccggacccagcgacgtctacgtctcg
ctcggccaggtcaagaagtacaacctgcgcaagggcgacgccgtcgtcggctccatcaag
cagccgcgcgagaacgagcagtccagccgccagaagtacaacgctctggtcaaggtcgac
tcgatcaacggcctgtcggtcgacgacgccgcgacgcgcgtggagttcaacaacctcacg
ccgctctacccgcaggagcgcctgcgcctcgagaccggacccgagaagctgacccagcgc
atcatcgacctggtcgcccccgtcggcaagggccagcgcggtctcatcgtcgcgccgccc
aaggcaggcaagacgatcgtgctgcagcagatcgcgaacgccatcgcgcacaacaacccc
gaggtccacctcatggtcgtgctcgtcgacgagcgccccgaagaggtcaccgacatgcag
cggacggtcaagggcgaggtcatcgcctcgacgttcgaccgcccggccgaagaccacacc
acggtcgccgagctggccatcgagcgcgccaagcgtctggtcgaactcggtcgcgacgtc
gtcgtgctcctcgactcgatcacccgtctgggccgcgcctacaacctgtcggcgcccacc
tcgggccgcgtgctcaccggtggcgtggacgcgtcggcgctctacccgccgaagcgcttc
ttcggtgccgcgcgcaacatcgagaacggtggctcgctcacgatcctcgccaccgctctg
gtggagaccggctcgaagatggacgacgtgatcttcgaggagttcaagggcaccggcaac
agcgagctccgcctgagccgccagctcgccgacaagcgcatcttcccggccgtcgacgtg
aacgcgtcgagcacccgccgcgaagagatgctgctgtcgcccgacgaggtcaagatcacc
tggaagcttcgccgtgccctggccggtctcgagccccagcaggccctcgaggtcgtgctc
ggcaagctcaaggagacgcagtcgaacgtcgagttcctcgtgcagatgcagaagtccatc
ccggcgccctcgcgcggcggtgacgacaacagcattcgctga

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