Microbacterium testaceum: MTES_0426
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Entry
MTES_0426 CDS
T01423
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
mts
Microbacterium testaceum
Pathway
mts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTES_0426 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mts03021
]
MTES_0426 (rho)
03019 Messenger RNA biogenesis [BR:
mts03019
]
MTES_0426 (rho)
Transcription machinery [BR:
mts03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MTES_0426 (rho)
Messenger RNA biogenesis [BR:
mts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MTES_0426 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
AAA_22
VWA_2
Mor
eIF-3_zeta
PIP5K
Motif
Other DBs
NCBI-ProteinID:
BAJ73390
UniProt:
E8NAW8
LinkDB
All DBs
Position
complement(435209..437350)
Genome browser
AA seq
713 aa
AA seq
DB search
MESISETQPVDAPEGAEIPAEELSAEAQGTDTDQAEAAVETPDAEGVDASDTEAAPADAA
QPEALFTDDTLTAEVPAVEEPAADTPAAEASTEPAAEPAADEPAVAEKPVKAPRKRAPRR
ATTASAKEKAAAEAAAAEAAASAEAEATPEAEAAPEAVVAPEATTPVTTAADVADDAAAT
EETPAVNEAEATPAEDAASVDAAAPEDAASEETASEDTASETASDAAETPATDDTADETP
ARGRGRNRSRNRNRNKPDAADKPEAQPATGGDEAEAPQQGGQRDGGSQNGQQAQQQGGTS
NRNRQRNKRRGPNTTGDEFDSEISEDDVLVPIAGILDVLDNYAFVRTTGYLPGPSDVYVS
LGQVKKYNLRKGDAVVGSIKQPRENEQSSRQKYNALVKVDSINGLSVDDAATRVEFNNLT
PLYPQERLRLETGPEKLTQRIIDLVAPVGKGQRGLIVAPPKAGKTIVLQQIANAIAHNNP
EVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDV
VVLLDSITRLGRAYNLSAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATAL
VETGSKMDDVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDEVKIT
WKLRRALAGLEPQQALEVVLGKLKETQSNVEFLVQMQKSIPAPSRGGDDNSIR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagacccagcccgtcgacgcgcccgagggcgccgagatccccgcc
gaagagctttcggccgaggcgcagggcactgacaccgaccaggccgaagcggccgtcgag
accccggatgccgagggcgtagacgcctcggacaccgaggccgcgcctgcggacgccgcg
cagcccgaggcgttgttcaccgacgacaccctcaccgcagaggtgccggcggtggaagaa
cccgccgctgacacccccgccgccgaggcgtcgaccgagcccgccgcggagcctgctgcc
gacgagcccgctgtcgcggagaagcccgtcaaggccccgcgtaagcgtgcgccccgtcgc
gccaccaccgcgtcggccaaggagaaggcggctgccgaagccgccgctgcggaagccgct
gcttccgccgaggcagaagccactcccgaggccgaggccgctccggaggccgtcgtcgcc
cccgaggccacgacgcccgtgaccaccgccgccgacgtcgcggatgacgccgccgcgacg
gaggagacgccggccgtcaacgaggccgaagcaactcccgcggaggacgccgcttccgtt
gacgccgccgcgcccgaggacgccgcgagcgaggaaaccgcgagcgaggacaccgcgagc
gagaccgcttccgacgccgcggaaacccccgcgaccgacgacaccgccgacgagacgccg
gcccgtgggcgtggccgcaaccggtcacgcaaccgcaaccgcaacaagcccgacgccgcc
gacaagcccgaggcgcagcccgccacgggcggcgacgaggctgaggccccccagcagggc
ggtcagcgcgacggcggttcgcagaacggtcagcaggcgcagcagcagggcggaacgagc
aaccgcaaccgtcagcgcaacaagcgccgcggcccgaacacgacgggcgacgagttcgac
tccgagatcagcgaggacgacgttctcgtcccgatcgccggcatcctggacgtgctcgac
aactacgctttcgtgcgcaccaccggttacctgcccggacccagcgacgtctacgtctcg
ctcggccaggtcaagaagtacaacctgcgcaagggcgacgccgtcgtcggctccatcaag
cagccgcgcgagaacgagcagtccagccgccagaagtacaacgctctggtcaaggtcgac
tcgatcaacggcctgtcggtcgacgacgccgcgacgcgcgtggagttcaacaacctcacg
ccgctctacccgcaggagcgcctgcgcctcgagaccggacccgagaagctgacccagcgc
atcatcgacctggtcgcccccgtcggcaagggccagcgcggtctcatcgtcgcgccgccc
aaggcaggcaagacgatcgtgctgcagcagatcgcgaacgccatcgcgcacaacaacccc
gaggtccacctcatggtcgtgctcgtcgacgagcgccccgaagaggtcaccgacatgcag
cggacggtcaagggcgaggtcatcgcctcgacgttcgaccgcccggccgaagaccacacc
acggtcgccgagctggccatcgagcgcgccaagcgtctggtcgaactcggtcgcgacgtc
gtcgtgctcctcgactcgatcacccgtctgggccgcgcctacaacctgtcggcgcccacc
tcgggccgcgtgctcaccggtggcgtggacgcgtcggcgctctacccgccgaagcgcttc
ttcggtgccgcgcgcaacatcgagaacggtggctcgctcacgatcctcgccaccgctctg
gtggagaccggctcgaagatggacgacgtgatcttcgaggagttcaagggcaccggcaac
agcgagctccgcctgagccgccagctcgccgacaagcgcatcttcccggccgtcgacgtg
aacgcgtcgagcacccgccgcgaagagatgctgctgtcgcccgacgaggtcaagatcacc
tggaagcttcgccgtgccctggccggtctcgagccccagcaggccctcgaggtcgtgctc
ggcaagctcaaggagacgcagtcgaacgtcgagttcctcgtgcagatgcagaagtccatc
ccggcgccctcgcgcggcggtgacgacaacagcattcgctga
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