Microbacterium testaceum: MTES_1765
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Entry
MTES_1765 CDS
T01423
Symbol
deaD
Name
(GenBank) superfamily II DNA and RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mts
Microbacterium testaceum
Pathway
mts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTES_1765 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mts03019
]
MTES_1765 (deaD)
03009 Ribosome biogenesis [BR:
mts03009
]
MTES_1765 (deaD)
Enzymes [BR:
mts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MTES_1765 (deaD)
Messenger RNA biogenesis [BR:
mts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTES_1765 (deaD)
Ribosome biogenesis [BR:
mts03009
]
Prokaryotic type
rRNA helicases
MTES_1765 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAJ74729
UniProt:
E8NB82
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All DBs
Position
1876051..1877808
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AA seq
585 aa
AA seq
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MASENPVDSAEAETAPETLTFADLGLDANVLKALKDVGYETPSAIQAATIPVLLQGRDVV
GLAQTGTGKTAAFALPVLSQMETGHKNPQALVLAPTRELALQVCEAFEKYAAHIKGVSVL
PVYGGQGYGQQLSALRRGVDVIVGTPGRIMDHLDKGTLDLSELKFLVLDEADEMLKMGFA
EDVETILADTPSTKQVALFSATMPAQIRRISAQYLNDPEEITVKTKTTTSANITQRYLIV
SYQQKIDALTRILEVENFEGMIVFTRTKNETETVAEKLRARGYTAAAINGDIAQVQRERT
VNQLKSGKLDILVATDVAARGLDVERISHVVNYDLPIDTESYVHRIGRTGRAGRTGDAIS
FVTPRERRMLTAIEKATRQPLTEMSLPSVDDVNATRLTRFDDAITTALEDTAAIATFRDV
VAHYVSHHDVPEADVAAALAVVAQGDTPLLLEEETLRQQRFDNDRPDRSSRDSRDGGSRD
SGPRRESSGRFATYRIAVGRRQRVEPRQIVGALANEGGLRRNDFGAIQIRQDFSLVELPA
DLSRDTINRLADTRISGQLIDLRLDQGGRSAKRSDRPQRRDRDRD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgaaaaccccgtcgactccgctgaagctgagaccgcccccgaaacgctcacc
ttcgccgatctgggtctggatgccaacgtgctcaaggccctgaaagacgtgggctacgag
accccctccgccatccaggcggccaccatccccgtgctgctgcaggggcgcgacgtcgtc
ggcctcgcccagacgggaaccggtaagaccgccgccttcgcgctgccggtgctgtcgcag
atggagaccggccacaagaatccgcaggcgctcgtgctcgcccccacccgcgagctggcg
ctgcaggtgtgcgaggcgttcgagaagtacgccgcgcacatcaagggcgtctcggtgctg
cccgtctacggtgggcagggctacggccagcagctgtcggcgctgcgccgcggcgtcgac
gtgatcgtcggaactcccggccgcatcatggaccacctcgacaagggcaccctcgacctc
agcgagctgaagttcctcgtgctcgacgaggccgacgagatgctgaagatgggcttcgcc
gaggacgtcgagacgatcctcgccgacaccccctcgaccaagcaggtcgcgctgttctcg
gccaccatgccggcgcagatccgccgcatctccgcgcagtatctgaacgaccccgaagag
atcacggtcaagaccaagaccacgacctcggcgaacatcacgcagcgctacctgatcgtg
tcgtaccagcagaagatcgacgccctcacgcgcatcctcgaggtcgagaacttcgagggc
atgatcgtcttcacccgcacgaagaacgagaccgagacggtcgccgagaagctccgcgcc
cgcggctacaccgccgccgcgatcaacggcgacatcgcgcaggtgcagcgcgagcgcacg
gtcaaccagctgaagtcgggcaagctcgacatcctcgtcgcgaccgacgtcgccgcgcgc
ggtctcgacgtcgagcgcatcagccacgtcgtcaactacgacctgccgatcgacaccgag
tcgtacgtgcaccgcatcggccgcacgggtcgcgccggtcgcaccggagacgcgatcagc
ttcgtgaccccgcgcgagcgccgcatgctcaccgcgatcgagaaggccacgcgtcagccg
ctgaccgagatgtcgctgccgagcgtcgacgacgtcaacgccacgcgcctcacccgcttc
gacgacgcgatcaccacggccctcgaagacaccgcggcgatcgcgaccttccgcgacgtc
gtcgcccactacgtgtcgcaccacgatgtgcccgaggccgacgtggccgcggccctcgcc
gtggtcgcccagggcgacactccgctgctgctcgaggaggagacgctgcgccagcagcgc
ttcgacaacgaccgccccgaccgctcttcgcgcgattcccgcgacggcggttcgcgcgac
agcggtccgcgtcgtgaaagctcgggtcgcttcgcgacgtaccgcatcgccgtcggccgc
cgccagcgcgtcgagccgcgccagatcgtcggtgctctcgcgaacgagggcggcctccgc
cgcaacgacttcggggcgatccagatccgccaggacttctcgctcgtcgagctgccggcc
gacctctcgcgcgacacgatcaaccgtctcgccgacacccgcatctcgggtcagctgatc
gacctgcgcctcgaccagggcgggcgctcggcgaagcgcagcgaccgtccgcagcgccgg
gaccgcgaccgcgactga
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