KEGG   Micromonospora tulbaghiae: CSH63_22815Help
Entry
CSH63_22815       CDS       T05651                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mtua  Micromonospora tulbaghiae
Pathway
mtua03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mtua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CSH63_22815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtua03400]
    CSH63_22815
Enzymes [BR:mtua01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CSH63_22815
DNA repair and recombination proteins [BR:mtua03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CSH63_22815
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2 mRNA_cap_enzyme RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AYF30230
UniProt: A0A386WS61
LinkDB All DBs
Position
complement(4955298..4956236)
Genome map
AA seq 312 aa AA seqDB search
MPGAPLKPMLATTGQLPAGAAWSYEFKWDGVRALADISRGDRHFYARSGVEITTAYPELL
NLAEQVDDALLDGEVVLFTDGQPSFTALAERMHVRNPAKAARLAATAPVTYMIFDVLRLD
GVDLTARPWRERRAALESLGLGAARWAVPPVFGDGPATYAAAGEHGLEGVMAKRVDSLYR
PGVRSPDWVKVKLEVTADFVVGGWRPGARRVGGLLVGVPGPDGRLIYRGRVGGGIGAAIE
RELLRELEPLRVTDSPFAAGVPREDARGAIWVTPRIVVEVKYGQRTPDGRLRFPRILRLR
PDKPPEEVDDAV
NT seq 939 nt NT seq  +upstreamnt  +downstreamnt
gtgcccggcgcgccgttgaagccgatgctcgcgacgaccgggcagctcccggccggcgcc
gcctggtcgtacgagttcaagtgggacggcgtacgcgcgctcgccgacatctcccgcggc
gaccggcacttctacgcccgctccggcgtcgagatcaccaccgcgtacccggaactgctc
aacctggccgagcaggtcgacgacgcgctgctcgacggcgaggtggtcctcttcaccgac
gggcagccctcgttcaccgcgctcgccgagcggatgcacgtgcgcaacccggcgaaggcg
gcgcggttggcggcgacggcacccgtcacgtacatgatcttcgacgtgttgcggctcgac
ggcgtcgacctgaccgcccggccgtggcgggagcggcgggcggcgctggagtcgctcggg
ctcggcgccgcccggtgggcggtgccgccggtcttcggcgacggcccggccacctacgcg
gcggccggcgagcacgggctggagggggtgatggccaaacgggtcgactcgctctaccgg
cccggcgtgcgctcgccggactgggtgaaggtcaagctggaggtcaccgccgacttcgtg
gtcggcggctggcggcccggcgcgcggcgcgtcggcggcctgctggtcggcgtgcccggc
ccggacggtcggctgatctaccgggggcgggtcggtggcgggatcggcgcggcgatcgaa
cgggaactgctgcgcgagctggaaccgctgcgcgtcaccgactcgccgttcgccgccggt
gtgccgcgcgaggatgcccggggcgcgatctgggtaactccccggatcgtggtggaggtc
aagtacggccagcgcacgccggacggccggctgcgcttcccgcgcatcctgcgcctgcgc
ccggacaagccgcccgaggaggtcgacgatgccgtctga

DBGET integrated database retrieval system