KEGG   Mycobacterium tuberculosis KZN 605: TBXG_000897Help
Entry
TBXG_000897       CDS       T02141                                 

Definition
(GenBank) ATP-dependent DNA ligase ligB
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mtz  Mycobacterium tuberculosis KZN 605
Pathway
mtz03030  DNA replication
mtz03410  Base excision repair
mtz03420  Nucleotide excision repair
mtz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mtz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TBXG_000897
   03410 Base excision repair
    TBXG_000897
   03420 Nucleotide excision repair
    TBXG_000897
   03430 Mismatch repair
    TBXG_000897
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtz03032]
    TBXG_000897
   03400 DNA repair and recombination proteins [BR:mtz03400]
    TBXG_000897
Enzymes [BR:mtz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TBXG_000897
    6.5.1.6  DNA ligase (ATP or NAD+)
     TBXG_000897
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     TBXG_000897
DNA replication proteins [BR:mtz03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    TBXG_000897
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     TBXG_000897
DNA repair and recombination proteins [BR:mtz03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TBXG_000897
   NER (nucleotide excision repair)
    Other NER factors
     TBXG_000897
   MMR (mismatch exicision repair)
    Other MMR factors
     TBXG_000897
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AFM48286
LinkDB All DBs
Position
complement(986674..988197)
Genome map
AA seq 507 aa AA seqDB search
MLLHDVAITSMDVAATSSRLTKVARIAALLHRAAPDTQLVTIIVSWLSGELPQRHIGVGW
AALRSLPPPAPQPALTVTGVDATLSKIGTLSGKGSQAQRAALVAELFSAATEAEQTFLLR
LLGGELRQGAKGGIMADAVAQAAGLPAATVQRAAMLGGDLAAAAAAGLSGAALDTFTLRV
GRPIGPMLAQTATSVHDALERHGGTTIFEAKLDGARVQIHRANDQVRIYTRSLDDVTARL
PEVVEATLALPVRDLVADGEAIALCPDNRPQRFQVTASRFGRSVDVAAARATQPLSVFFF
DILHRDGTDLLEAPTTERLAALDALVPARHRVDRLITSDPTDAANFLDATLAAGHEGVMA
KAPAARYLAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRRGKLSNIHLGARDPATGGFVM
VGKTFKGMTDAMLDWQTTRFHEIAVGPTDGYVVQLRPEQVVEVALDGVQRSSRYPGGLAL
RFARVVRYRADKDPAEADTIDAVRALY
NT seq 1524 nt NT seq  +upstreamnt  +downstreamnt
gtgctccttcacgacgtggccatcacctcaatggacgtggccgccacctcgtcgcggctg
accaaggtcgcgcgcatcgccgccctgttgcaccgcgccgcgccagacacacagctggtc
acgatcatcgtgtcgtggctctccggcgagctgccgcaacgccatatcggtgtcgggtgg
gcggcattgcggtccctaccgccgcccgcgccgcaaccggcgttgaccgtcaccggtgtc
gacgccaccctctctaagatcggcactctatcgggcaaagggtctcaggcgcagcgcgcg
gcactcgttgcggaattgttctccgccgcaaccgaagctgagcaaacctttttgttgcga
ctgctcggcggtgaactgcgccagggcgcaaagggcgggatcatggccgatgcggtcgcc
caggccgccgggctcccggccgcgacggtccaacgcgccgcgatgctaggcggcgacctg
gcggcagcggcggcggccggcctgtccggcgcggcgctggacaccttcaccctgcgagtg
ggccgaccgataggcccgatgctggcacagaccgcgaccagcgtccatgatgcactcgaa
cgtcacggcggcacaaccattttcgaggctaaactagacggcgcgcgagtgcagatccac
cgggcaaacgaccaggtcaggatctacacccgaagcctggacgacgtcactgcccggctg
cccgaggtggtggaggcaacactggcactgccggtccgggatctagtggccgacggcgag
gcgatcgcgctgtgcccggacaaccggccgcagcgtttccaggtcaccgcatcacggttc
ggccgatcggtcgatgttgcggctgcccgcgcgacgcagccactttcggtgttcttcttc
gacatcctgcatcgggatggtaccgacttgctcgaagcgccgaccaccgagcggctggcc
gccctggacgcactggtgccggctcggcaccgcgtggaccggctgatcacgtccgatcca
acggacgcggccaacttcctggatgcgacgctggccgccggccacgagggggtgatggcc
aaggcaccggccgctcgttaccttgcgggtcgccgcggagcgggctggctgaaggtcaag
ccggtgcacacactcgacttggtggtgctcgcggtggaatggggctcgggacgccggcgc
ggcaagctctcgaatattcacctgggcgcacgcgatccggctaccggtggattcgtgatg
gtgggcaagaccttcaaaggaatgaccgacgccatgctggactggcagaccaccaggttt
cacgagatcgcggtgggtccgacagacggctacgtcgtccaacttaggcccgagcaggtg
gtcgaggtagccctcgacggcgtgcaaaggtcgtcgcgctacccgggcgggctggcattg
cggtttgcccgcgtggtgcgctaccgcgccgacaaggacccggccgaggccgacaccatc
gatgccgtgcgcgcgctctactga

DBGET integrated database retrieval system