Pseudoduganella umbonata: FCL38_18660
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Entry
FCL38_18660 CDS
T06138
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00061
Fatty acid biosynthesis
mum00071
Fatty acid degradation
mum01100
Metabolic pathways
mum01212
Fatty acid metabolism
mum02024
Quorum sensing
Module
mum_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FCL38_18660
00071 Fatty acid degradation
FCL38_18660
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCL38_18660
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mum01004
]
FCL38_18660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mum04147
]
FCL38_18660
Enzymes [BR:
mum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FCL38_18660
Lipid biosynthesis proteins [BR:
mum01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
FCL38_18660
Exosome [BR:
mum04147
]
Exosomal proteins
Exosomal proteins of breast milk
FCL38_18660
Exosomal proteins of breast cancer cells
FCL38_18660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
LpxD
Motif
Other DBs
NCBI-ProteinID:
QCP12221
LinkDB
All DBs
Position
complement(4478460..4480130)
Genome browser
AA seq
556 aa
AA seq
DB search
MEKIWLKSYPEGVPAEIDVSQYTSVTHLLEDSFRKYADEKAYVCMDKFLTYAQVDQMSRK
FGAWLQGKGLQKGARVAIMLPNVLQYPVAMAGILRAGYTVVNVNPLYTPRELAHQLKDSG
AEAIIVLENFANTVQQVLHETPVQHVIVATMGDLLGGVKGAIVNFVVRRVKKMVPAFSLP
RAVSFKQVLAEGGRMTLHPARIGHDDIAFLQYTGGTTGVSKGAVLLHRNVVANVLQNEAW
LHMGPQQEQVVFVCALPLYHIYSLTISAFMGMRLGGLNVLIPNPRDIPGFVKELAKYRVT
VFPAVNTLYNALLNNPDFARLDFSSYKVCNGGGMAVQQAVADKWLKLTGTPIIEGYGLSE
TSPVATANRVDISEFTGTIGLPIPSTDVAILDDDGNEVPLGTAGEIAIRGPQVMAGYWQR
PDETARSMTADGFFKTGDVGIMDERGYTKIVDRKKDMIIVSGFNVYPNEVEGVVAAHPGV
LECACIGVPDKNSGEAVKLFVVRKDPNLTAESLMDFCKHELTAYKKPKYIEFRDDLPKTN
VGKILRRQLRDEKKAA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggttgaaatcctaccccgaaggcgtacccgccgagatcgacgtctcg
caatacacctcggtgacgcatctgctggaggattcgttccgcaagtatgccgatgaaaag
gcctacgtctgcatggacaagttccttacctatgcgcaggtcgaccagatgtcccgcaag
ttcggcgcctggctgcagggcaagggcctgcagaagggcgcgcgcgtggcgatcatgctg
ccgaacgtgctgcaatacccggtggcgatggccggcatcctgcgcgccggctatacggtg
gtcaatgtcaatccgctgtacacgccgcgcgagctggcgcaccagctgaaggattccggc
gccgaagcgatcatcgtgctggaaaacttcgccaatacggtgcagcaggtgctgcacgaa
accccggtgcagcacgtgatcgtggccacgatgggcgacctgctgggcggcgtgaagggc
gcgatcgtcaacttcgtcgtgcgccgcgtgaaaaagatggtgcccgccttctcgctgccg
cgcgccgtgtcgttcaagcaggtgctggccgaaggtggccgcatgacgctgcacccggcc
aggatcggccacgacgacatcgccttcctgcaatacacgggcggtaccaccggcgtttcg
aaaggcgccgtgctgctgcaccggaacgtggtggccaacgtgctgcagaacgaagcctgg
ctgcacatggggccccagcaggagcaggtggtattcgtctgcgcgctgccgctgtaccac
atctattcgctgacgatttccgccttcatgggcatgcgcctgggcggcctgaacgtgctg
atcccgaacccgcgcgacattcccggcttcgtcaaggaactggcgaaataccgcgtgaca
gtcttcccggccgtgaacacgctgtacaacgcgctgctgaacaacccggacttcgcccgg
ctcgatttctccagctataaagtatgcaacggcggcggcatggccgtgcagcaggccgtc
gccgacaagtggctgaagctgaccggcacgccgatcatcgagggctacggcctgtccgaa
acttcgccggtggccaccgccaaccgggtcgacatcagcgagttcaccggcaccatcggc
ttgcccatcccatccaccgacgtggcgatcctggatgacgacggcaacgaggtgccgctc
ggtacggccggcgagatcgccatccgcggcccgcaggtgatggccggctactggcagcgc
cccgacgaaacggccaggtcgatgacggccgacggcttcttcaagaccggcgacgtgggc
atcatggacgagcggggctacaccaagatcgtcgaccgcaagaaggacatgatcatcgtt
tccggcttcaacgtgtatccgaacgaagtcgaaggcgtggtggccgcgcacccgggcgtg
ctggaatgcgcgtgcatcggcgtgccggacaagaattccggcgaagccgtgaaactgttc
gtggtgcgcaaggatccgaacctgacggcggagtcgctgatggacttctgcaagcacgag
ctgacggcgtacaagaagccgaagtacatcgagttccgcgacgacctgccgaagacgaac
gtgggcaagatcctgcggcggcagctgcgggacgagaagaaggctgcttga
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