Meriones unguiculatus (Mongolian gerbil): 110547921
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Entry
110547921 CDS
T05884
Symbol
Trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110547921 (Trim71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110547921 (Trim71)
04121 Ubiquitin system [BR:
mun04121
]
110547921 (Trim71)
Enzymes [BR:
mun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110547921 (Trim71)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110547921 (Trim71)
Ubiquitin system [BR:
mun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110547921 (Trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
COG5_N
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
110547921
NCBI-ProteinID:
XP_060242106
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All DBs
Position
6:37980983..37994586
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AA seq
592 aa
AA seq
DB search
MGVQAMFHVLHLYCDTCSVPICRECTLGRHGGHSFAYLQDALQDSRALTIQLLADAQQGR
QALQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKS
LYLQVEKLRQSLNKLESTISAVQQVLEEGRALDVLLARDRMLAQVQELKTIRSLLQPQED
DRVMFTPPDQALYLALKSFGFVSSGSFAPLTKATGDGIKRALQGKVASFTVIGYDHDGEP
RLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVMLCNQHIENSPF
KVVVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVCVDKEGYIIVADRSNNRIQVFKPC
GSFHHKFGALGSRPGQFDRPAGVACDASRRIIVADKDNHRIQVFTFEGQFLLKFGEKGTK
NGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPRGVAFN
QEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNH
RVQMFEANGSFLCKFGAQGTGFGQMDRPSGLAVTPDGLIVVVDFGNNRILIF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggagtccaggccatgtttcatgtactgcatctgtattgcgacacctgctctgttccc
atctgcagagagtgcacactcggccgccacggaggccacagcttcgcctacctccaggac
gccctgcaggactcacgggcactcaccatccagctgctggctgatgcccagcagggccgc
caagctctccagctgagcatcgagcaggcacagactgtggcagaacaggtggaaatgaag
gcgaaggtggtccagtcggaggtcaaggccgtgacagctcgccacaagaaggctctggag
gagcgtgagtgcgagctgttgtggaaggtggagaagatccgccaggtgaaggccaagtct
ctgtacctgcaggtggagaagctgcgccagagtctcaacaagctggagagcaccatcagc
gctgtccagcaggtcctggaagagggccgcgccctggacgtcctgctggcccgagaccgc
atgctggcccaggtgcaggagctcaagaccatccggagcctcctgcagccccaagaggac
gaccgagtcatgttcacaccccctgaccaggccctgtaccttgccctcaagtcttttggc
tttgttagcagcgggtcctttgccccgctcaccaaggccacgggagatggcatcaagcga
gccctccagggtaaggtggcctccttcaccgtcataggctatgaccatgatggcgagccc
cgcctctcaggcggcgacctgatgtcggctgtggtcctgggccccgatgggaacctgttc
ggcgcagaagtgagcgatcagcagaatgggacgtacgtggtgagctatcggccccagctg
gagggcgagcacctggtgtcggtgatgctgtgcaaccagcacatagagaacagccccttc
aaggtggtggtcaagtcaggccgcagctacgtgggcatcgggctccccgggctgagcttt
ggcagtgagggcgatggggaaggcaagctctgcaggccctggggcgtgtgtgtggataag
gagggctacatcatcgtggccgatcgcagcaacaaccgaatccaggtgttcaagccctgt
ggctccttccaccacaagtttggtgccctgggttcccggcctgggcagtttgaccggcca
gctggggtggcctgcgacgcctcccgcaggatcatagtggccgacaaagacaatcatcgc
attcaggtcttcacctttgagggccagttcctcctcaagtttggtgagaaaggaaccaag
aatgggcagtttaactacccttgggatgtagcagtgaattctgagggcaagatcctggtt
tcagatacccgaaatcaccgaatccagctgtttgggcctgatggggtcttcctgaataag
tacggcttcgaggggtctctctggaagcactttgactctccacggggcgtggctttcaac
caggaaggtcacctggtggtcaccgatttcaacaaccaccggcttctggtcattcacccc
gattgccagtctgcccgcttcttgggctcagagggcaccggcaatgggcagtttcttcga
ccacagggtgtggccgtggaccaggaagggcggatcattgtggccgattccagaaatcac
cgggtgcagatgtttgaggccaatggcagcttcctgtgcaagtttggtgctcaaggcact
ggcttcgggcagatggaccgcccgtcgggtcttgcagtcacgccggatggcttgatcgtt
gtggtggactttggcaacaatcgaatcctcatcttctaa
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integrated database retrieval system
