Meriones unguiculatus (Mongolian gerbil): 110555272
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Entry
110555272 CDS
T05884
Gene name
Ciita
Definition
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04612
Antigen processing and presentation
mun05145
Toxoplasmosis
mun05152
Tuberculosis
mun05164
Influenza A
mun05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
110555272 (Ciita)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
110555272 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
110555272 (Ciita)
09172 Infectious disease: viral
05164 Influenza A
110555272 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
110555272 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mun01001
]
110555272 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mun04054
]
110555272 (Ciita)
Enzymes [BR:
mun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110555272 (Ciita)
Protein kinases [BR:
mun01001
]
Serine/threonine kinases: Other
TAF1 family
110555272 (Ciita)
Pattern recognition receptors [BR:
mun04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110555272 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
110555272
NCBI-ProteinID:
XP_021504081
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MNHFQAILAQVRTLLSSQQPRQVQALLDGLLEEELLSREYHCALLHEPDGEALARKISLT
LLEKGDLDSAFLSWVCSRLQAPVVERDTSYWDHAGRSLCATMELGSLEGSYLELLNSDAD
PLHLYHLYDQMDLAGEEEIELCSEPDTDTINCDQFSKLLQDMEGDEETREAYANIAELDQ
YVFQDSQLEGLGKDLFIEYIGAEEGCGRSTEVPGEAGRRPQKRRFPEEHTMDSKHGKLAE
PSMVPMLTGSFLMGPANLSTMPFLPPASSNQEPAPSHTDLEGAAQMPVSSSSSSLNCLDL
PAGHIQILTTLPQGLWQISGAGAGLSNVLIYHGEMPQVNQGLPSSSPTVPSLPKSPERPG
STSPFAPSAADLPNMPEPALTSRVNETEDTAPSLDQEDPESSNKLPKWPESVERFQHSLQ
DKYQLLPESLTGPLVAMELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVASD
CRRPRETQVIAVLGKAGQGKSHWARTVTYAWARGQLPQYDFVFYVPCHYLDRSGHTYHLR
DLLCPPSLQPLAMDDEVFGHIVRQPDRILLILDAFEELEAQEGLLHGPCGPLSSESCSLR
GLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSIKQVQTYMRQYFENSG
TAETQDKALGLLEGQPFLLTHSHSPALCKTMCQLSKTLLEQGTEAQLPCTLTGLYVGLLG
PVARDSPPGALIELAKLAWELGRRHQSTLQETQFPSVEVKTWAVTQGLVQPALGTTEAQL
AFSSFLLQCFLGAVWLAQCSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLTGLVFQPR
AHCLGALVEPAVAAGADRKRKVLTRYLKRLQLGTLRAGRLLELLHCAHETQEPGIWEHVA
RQLPGHLSFLGTRLTPPDVHVLGRALESASQDFCLDLRQTGIEPSGLGNLVGLSCVTGFR
ASLSDTMVLWESLQQQGEAKLLQAAEEKFTIEPFKAKSPKDVEDLDSLVQTQRLRNPSDD
AAKGLPAIQDLKTLEFSLGPILGPQAFPTLARILPAFSSLQHLDLDSLSENKIGDKGVSQ
LSATFPQLKALETLNLSQNSITDVGACELAEALPALAKSLLRLSLYNNCICDAGARSLAQ
VLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQHLDAR
ISLR
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccaggccatcctggcccaggtgcgaacactactctccagccagcagccc
aggcaggtgcaggccctcctggatggcctgctggaagaagagctgctctcacgggaatac
cactgtgctctgctccatgagcctgatggtgaggctctggccaggaagatttccctgact
ctgctggagaaaggggacttagactcagctttcttgagctgggtctgcagcaggctacag
gctccagtggtagagagagacaccagctactgggaccatgcaggccgtagtctgtgtgcc
accatggaactcgggtctctggagggcagctacctggagctccttaacagcgatgcggac
cccctacacctctaccacctctatgaccagatggacctggcgggggaggaggaaatcgag
ctctgctcagagcccgacacagacaccatcaactgcgaccagttcagcaagctgttgcaa
gatatggaaggggatgaagagacccgggaggcctatgccaacattgcggaactggatcag
tatgtgttccaggacagccagctggagggcctcggcaaggacctcttcatagagtatatt
ggagcagaggaaggctgtgggaggagtaccgaggtccctggagaagcaggaaggagacct
cagaagagacgcttcccagaagagcacactatggactcaaagcacgggaagctagctgag
ccctctatggtacccatgctgactggcagcttcctgatggggccagcaaacctctccacc
atgcccttcctaccacctgcttcgtccaatcaagagccagcacccagccacacagaccta
gagggagctgctcagatgcctgtgtcctcctctagctcctcactgaactgtttggatctc
cctgctgggcatatccagatcctcaccactctacctcagggactctggcaaatctcaggg
gctggcgcagggctctccaatgtcctaatctaccatggtgagatgccccaggtcaaccaa
ggactcccttcaagcagccccactgtccccagtcttcccaaatccccagagcggcccggc
tccaccagcccctttgcaccatctgcagctgacctgcccaacatgcccgaacctgcgctg
acctcccgtgtaaatgagacagaggatacagcaccctccctggaccaagaggatcccgag
tcttccaacaagcttccaaaatggccagagtctgtggagcggttccagcactccctgcag
gacaagtaccagctgttgcctgagagcctgaccggtcccctggtggccatggagctggtg
cgagccaggttggagagaggcagcaacaaaagtcaggaaagggaactggccactcctgac
tggacagagcgccagctagcccacggtggtctggctgaggtgcttcaggttgccagtgac
tgcaggcgaccacgagagacacaggtgatcgccgtgctgggtaaggccggccagggcaag
agccactgggcccgaactgtgacttatgcctgggcacgtggccagttgccacaatatgac
tttgtcttctatgtcccctgccattacttggatcgttcagggcacacgtaccacctacgg
gatttgctctgtcccccaagcctgcagccactggccatggatgatgaagtctttggtcac
attgtgaggcagccagaccgcatcctgctcattctagatgcttttgaggagctagaagcc
caagaaggcctcctgcatggaccatgtggacctctgtcctcagagtcctgttccctccgg
ggactgctagctgggcttttccagcggaagctgctgcgtggctgcaccctgctcctcaca
gcccgaccccggggccgcctggctcagagcctgagcaaggcagatgccatctttgaggta
cccagcttctctattaaacaggtccagacttacatgaggcaatactttgagaactcaggg
acagcggagacccaagacaaggccctgggcctcctggagggccagccttttctcctcacc
cacagtcatagccctgctctatgcaagaccatgtgtcagctctccaagaccctgctggaa
cagggaacagaggcccagttgccttgcacacttacagggctctatgttggcctgctaggc
cctgtagcccgggacagtcctccaggagccttaattgagctggctaagctggcctgggag
ctgggccgcagacaccaaagcaccttgcaagaaacccagtttccatcagtggaggtgaaa
acctgggcagtgacccaaggcttggtgcagcctgccctggggaccacagaggcccaactg
gccttctccagttttctgctacaatgcttcctgggtgctgtgtggctggcacagtgcagt
gaaataaaagacaaggagctgccacagtacctggccttgaccccaaggaagaagagacct
tatgacaactggcttgaaggtgtgccacgctttctgactggattggttttccagcctcgt
gcccactgcttgggggctctggtggagcctgcagtggctgcaggggcagacaggaaacgg
aaggttcttaccaggtacctgaagcgcctgcagctggggacacttcgggctgggaggttg
ctggagctgctgcactgtgctcacgagactcaggaacctgggatttgggagcacgtggca
cgtcaactccctgggcacctctccttcctgggcacccggctcacacccccagatgtacat
gtgctgggcagggccttagagtcggccagccaggacttctgcctggaccttcgtcagact
ggcattgagccctctggactgggaaacctcgtgggactcagctgtgtcaccggtttcagg
gcctcactgagtgacacaatggtgctatgggagtccctacagcagcagggagaggccaag
ctactccaggcagcagaggagaagttcaccattgagccatttaaggccaaatctccaaag
gatgtggaagacctggacagcctcgtgcagactcagaggctgagaaacccctcagatgat
gcagctaagggtcttcctgctatccaggaccttaagacgctagagttctcgctgggcccc
atcttgggcccgcaggctttccctacactggcaaggatccttccagccttctcctccctg
cagcacttggacctggactcacttagtgagaacaagatcggggacaaaggtgtgtcacag
ctctcagccaccttccctcagctgaaggccctggagactctcaacctgtcccagaatagc
atcactgatgtgggtgcctgcgagcttgcagaagcgcttccggccctagccaagtccctc
ctgaggctgagcttgtacaataactgcatctgtgacgcaggagccaggagcctggcacaa
gtgcttccagacatggtgtccctgcgggtgatggacgttcagttcaacaagttcacggct
gccggtgcccagcagctggcctccagccttcagaagtgtcctcaagtcgaaacgctggcg
atgtggacacccactatcccctttggggttcaggagcacctgcagcacctggatgccagg
atcagcctgagatga
DBGET
integrated database retrieval system
