Musa acuminata (wild Malaysian banana): 103968942
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Entry
103968942 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC103968942 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mus
Musa acuminata (wild Malaysian banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
103968942
03400 DNA repair and recombination proteins [BR:
mus03400
]
103968942
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103968942
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
103968942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103968942
NCBI-ProteinID:
XP_009380586
UniProt:
A0A804KZ17
LinkDB
All DBs
Position
10:complement(27518023..27554017)
Genome browser
AA seq
1584 aa
AA seq
DB search
MANRRSSKRSYLEFLDGNDDGDSKVYRFQILLPNGASVRLIFNDPGEDMFLDEFIHIIRK
ELEKTAETTTKASRKIFWNGNIYLEDMSDNKIRKKISFSHFRTNKCHILRLHDEGGESLD
TYHNMWDLTPHTDLLAELPAEYTFQTALADLLDNSLQAVWSNGSGERRLVRVTVDEQKIE
IFDSGQGMDGSEENCITKWGKMGSSKHRACRSKAIGTKAPYLMPFFGMFGYGGPIATMHL
GRHATVSSKTKGSRKVYSLYFSREALLNQSTPKCIWRTDGGVREPLDEETQTSPHGSFTQ
VVIRDLKLRCLDIYKLQCFLKDIYFPYIQCDTEYTSRKTAMPIEFEVNDINLAEIQGGEV
AITNLLSCNGPDFIMQLRFMIKSENPGSLGFQEANAQLKCVYFPIVEGKENIERILEKLV
QDGYEIKENFGAFSRVSIRRLGRLLPDSRWNTLPFMETKQRRGDKAHLLKRCCKRVKCFV
ETDAGFSPTPSKTDLAHHHPFTRALRNFGNILCGKESEVTIEILKDGKHSSILQLEKEYR
DWVIQMHDRYDEEINCGEDEPVHIIGPQNKKQLGITADVVRVHQAIKRRGIIWESGQKVK
IFKGATGCLKKNLYATLEYILIEGFQGDVGGDARLICRPLDCSDEKGCSILVDNGNASLD
MHDSLSFPISLIDSENIQAIDLATWNCQVEKHKGRLPSRIDILAGQQCSLLGISGELPME
APVVAGFTPPREIVAVIRPANFSSSMASKGLDQKNIVKNEFEMTLKISHKCRAKQNEQMT
LAHTKSVKPSSHTGISGLYIFGLQDICSKLFYKAGIYIFTFFVNCKNTNIKHLEARVVVK
PDTKVCKWRFVFDEWGPFTDKQLLSTRVGSYISYLSVVCLDRYSNQIPFSSIPEATIKIF
VEECMLLHVDKMKMILSSDQLLLELKDILIESSKLDMIQPSYEAVLAICSQDGLFSAEIP
CKVMPGTLSSVRLQTSLQEGEYLVPEEVIEELVLEMFDAYGNHIEEGVEVFIHTDGFSFQ
DHLGYIRKVNCKGCIDLSGLLTVSASFGSYVHLSVSYDKEIVYKKKFQVAQRELRAVSGV
SGIHPIGCQLENVIFEVFDPDGQVDEKIHGQYHTLRIVSDSLKLDDTIQYTFHHGRCTVP
FVPVPRRPGPFCFSAFHTRYHDLCTDIEVNVLEASKLELFAATESYGTFQSQVLDHMDSS
KCLSHQKDLLVKYISHHTQILDEKITEVGLKIGEHERKLKTLNDQKIQVEQDIHDLRVFI
GPQYLSQIESLSSSREEILKRIGRKGDTAAAICCCLSKAIQKQEPWKCFTNCTQDVVGLV
ALLGNVNTSKNSRMFSQFLGEDNMLAIVCKSYEAASRMEYYDEAGKIDHQQAVHGAAATL
GINISRRFPVICLEDIRPYQGRIMPNDPQRRLCLSNPLLQSGAVPAGFLGYAVNMINLDI
HHCKTKTLSGHGLRETLFYLLFGETQVYQTRADMRQARSCIKQGAISLDGGIVRASGFIL
LGDCEPDVTFPVIGTQAHRAFSQDMVMNIKQMEEKKGLLTAIQQEIVKEYEAYTEDMAKF
KKRSDRLRELLTESSSTTNLLEWK
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgaaggtcatctaaaagatcatatttagaattcttagatggaaatgatgat
ggtgattctaaagtatacagatttcaaattctcctgccgaatggtgcaagtgtacggctt
atatttaatgatccaggggaagatatgttcttggatgagtttatacacatcatcagaaag
gaacttgaaaaaactgcagaaacgacaacaaaagctagtcgaaagattttctggaatgga
aacatctatctggaggatatgtctgacaacaagattagaaagaaaatctcttttagccat
tttcgcactaacaaatgtcacatactaaggcttcatgatgagggaggtgaatctcttgat
acttaccataacatgtgggatctgacaccacatactgatctgttagcagaacttccagca
gaatatacctttcaaactgctctagctgacttgcttgataattctttgcaagctgtatgg
tctaatggctctggtgaaaggaggctagttagagtgacagttgatgagcaaaaaatcgaa
atttttgatagtggccaggggatggatggtagtgaggagaactgtatcacaaagtgggga
aagatgggttcttctaagcatagggcttgtagaagcaaggccattggtactaaagctcca
tatttaatgcctttctttggcatgtttggttatggtgggccaattgccactatgcatttg
ggaaggcatgctactgtgtcatcaaaaactaaaggttcaaggaaggtgtattctctatat
ttttcaagagaggctttgttaaaccagtcaacaccgaaatgtatctggcggactgatgga
ggtgtgagggaacctttagatgaggaaactcaaacatcacctcatgggagtttcacccag
gtggtgattagggatcttaaactaaggtgcttggacatatataaacttcagtgcttcttg
aaagatatttattttccatatatacagtgtgatacagagtacacttcacgaaaaacagct
atgccaattgagttcgaggtgaatgacattaaccttgctgaaattcaaggaggagaggtg
gcaattactaatttactctcttgtaatggtcctgatttcatcatgcaactaaggttcatg
attaaatcagaaaatccaggatcattaggttttcaagaagccaatgcacaattgaagtgt
gtttactttcctattgttgaggggaaagagaacattgagcgaattcttgagaagcttgtt
caagatggttacgaaattaaagaaaatttcggcgccttttctcgtgtatcaatacgtagg
cttggtcgtctccttccagattccagatggaatactcttcctttcatggaaactaaacaa
agaaggggagataaagctcatttattaaagagatgctgcaaaagggtgaaatgctttgtt
gagacagatgctggtttttctcctactccttctaagactgatttggcacatcatcaccct
tttactcgtgcattgaggaactttggcaacattctttgtggaaaagaatcagaggtaacc
attgagatactcaaagatggaaaacactccagtattttacaattagagaaggaatatcga
gattgggtaattcagatgcatgatagatatgatgaagaaatcaattgtggtgaggatgaa
cctgtacatattattggccctcaaaacaagaaacaacttggtataactgctgatgttgtg
agagtgcaccaagctataaagagaagaggcataatatgggagtcaggacaaaaggttaaa
atttttaaaggtgcaactggatgtttgaaaaagaatttgtatgcaactctagaatacatt
ttaatagaaggatttcaaggtgatgtggggggtgatgcacgactaatttgcaggccactg
gattgttctgatgaaaaaggctgctcgattttggtggataatggaaatgcaagcttggat
atgcatgattctctatcttttccaataagtctaattgattctgaaaatattcaagcaatt
gaccttgcgacatggaattgccaagttgagaagcataaagggagacttccttccagaatc
gacatactagctggtcaacagtgtagcctgttagggatcagtggggaactacctatggaa
gctcctgtggttgctggttttactcctcctagagaaattgttgctgttattagacctgca
aattttagctcttcgatggcctccaaaggcctagatcagaagaatatcgtgaagaatgag
tttgagatgaccttgaaaattagtcataaatgtagagctaagcagaatgaacagatgaca
cttgcccatacaaaaagtgttaaaccttcatcacatactggcatcagtggattatatata
tttgggttgcaagatatatgttcgaaactattttataaagccggaatttatatattcacc
ttctttgttaattgtaaaaataccaatatcaaacacctagaagcacgagtagttgtgaag
cctgacacaaaggtttgcaagtggcgatttgtgtttgatgaatggggccctttcactgat
aagcaactactttctactagggttggttcctatatttcgtatctttctgttgtgtgtctt
gatcggtactcaaatcaaattccattttcaagtatacctgaagctacgataaaaatattt
gtggaagaatgtatgcttctccatgttgacaaaatgaaaatgatcctttcatctgatcag
ttattgttggaattaaaggatatattgattgaaagcagcaagctggacatgattcagcca
agttatgaagctgtgttggcgatatgttcgcaagatggtcttttctctgctgaaattcca
tgtaaagtcatgccgggtaccttatcttccgtgaggctgcaaacttctctccaggaagga
gaatatttggttccagaagaagtgattgaagaacttgtattagagatgtttgatgcttat
ggtaatcatattgaagaaggcgtggaagtgttcatccacactgatgggttttcctttcaa
gaccacttaggttatattcgaaaggtgaactgcaaaggatgtatcgatcttagtggcctt
ctaactgtgtcagctagttttggttcatatgtccacctttcagtttcgtatgataaggag
attgtttataagaagaagttccaagttgcacaaagggagttgagagctgtgtctggggtc
tccggcattcatccgataggttgtcaattggagaatgttatatttgaagtttttgatcct
gatggacaagtagatgaaaaaatacatggtcaatatcacacacttagaatagtatcagat
tcattgaaattggatgatacaattcagtacactttccatcatggccggtgcactgtgcct
tttgtcccagttccccgcagaccagggcctttttgcttttcggcttttcatacacgttac
catgatctttgcactgatattgaggtcaatgttttggaggcttcaaagttggagctattt
gctgcaacagaatcatatggaacatttcaatctcaggttttagatcatatggactcatca
aagtgtctctctcatcagaaggacctcctagtgaagtacatttctcatcatactcagatt
cttgatgaaaaaattactgaagttggattgaagattggagagcatgagaggaaactaaag
acactgaatgatcagaagatacaggttgagcaagatattcatgatctgcgagtgttcatt
ggacctcaatatttgagccaaattgagtctttgagttcttcaagagaggaaatccttaaa
cgaataggacgaaaaggtgatactgccgctgctatttgctgctgtctttctaaagctatc
cagaagcaagaaccttggaagtgctttacaaactgtacgcaagatgttgttggccttgtt
gctcttcttggaaatgttaatactagcaaaaatagcaggatgttttcacagtttttgggt
gaagataatatgcttgcaattgtttgcaaatcttatgaagctgcaagtagaatggagtat
tatgatgaggctggaaaaattgatcaccagcaagctgttcatggagctgcagctacactc
ggcattaacataagtaggagatttcctgtaatatgcctcgaagacataagaccataccaa
ggtcgaatcatgcctaatgatcctcagaggagactatgtttgtcaaatccattgttgcaa
tctggggcagttcctgctggatttttagggtatgcagtgaacatgatcaacttagatatt
catcactgcaagacaaaaacactttcaggtcatggccttcgggaaaccttgttctatctg
ctgtttggtgaaactcaagtatatcagactagggcggacatgagacaagctaggtcctgt
attaagcaaggagctatttctctggatggtgggattgtgagggccagcggatttatttta
cttggagactgtgaaccagatgtaacgtttcctgtcattggaacgcaagcacatagagca
ttttcacaggatatggtaatgaatataaagcaaatggaggagaagaagggtcttctgaca
gcaatccaacaagaaatagtaaaagaatatgaagcctacacagaggacatggccaagttt
aaaaaaagaagtgataggttacgtgagttattgacagaaagttcttcaacaacaaattta
ctggagtggaaatga
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