Musa acuminata (wild Malaysian banana): 103983179
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Entry
103983179 CDS
T03447
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03420
Nucleotide excision repair
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103983179
09124 Replication and repair
03420 Nucleotide excision repair
103983179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mus03051
]
103983179
03400 DNA repair and recombination proteins [BR:
mus03400
]
103983179
Proteasome [BR:
mus03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103983179
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103983179
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
TECR_N
UBA_3
Dsc3_N
SPATA3
Motif
Other DBs
NCBI-GeneID:
103983179
NCBI-ProteinID:
XP_009398645
UniProt:
A0A804IUD8
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Position
4:complement(21111761..21122637)
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AA seq
389 aa
AA seq
DB search
MKLTVKTLKGTHFVIRVQPNDTIIAVKKNIEQEQGKDSYPWGQQLLIHNGKVLKDETTLE
ENKVNEDGFLVVMLSKSKAAGSSGSSSAQPPTTSAVQHPAPKEPPAQVPVQVPAQVSAQT
PSQVPAQVPPRISAEAPSQILASADAYGQAASNLIEGSNLEQMVGQLMEMGGGNWDRETV
LLALRVAYNNPERAVEYLYSGIPATAEIAVPVDPFPSSQAFAQGADSTDLAAPGHPSGAP
NSSPLNMFPQGNINTGVGTGGGSLDFLRNNQQFLALRAMVQANPQILQPMLQELSKQNPQ
LLRLIQEHHAEFLQLINEPIEGFEGDMFDQADQDEMPHTINVTAEEQEAIRRLEAMGFDR
ARVIEAFLACDKNEQLAANYLLEHAGDED
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggtgaagacactgaagggcacccacttcgtgatccgggttcagcccaac
gacacgattattgctgtgaagaaaaacattgagcaagaacaaggaaaagacagctatccg
tgggggcaacaattgctgattcataatggaaaagttttaaaagatgaaaccacattggaa
gagaacaaagttaatgaagatggtttccttgtagtcatgcttagcaagagtaaagctgca
ggctccagtgggtcttcatctgcacagcctccaacaacttctgcagtccagcatcctgct
cccaaggaacctccagctcaagttccagtgcaagttccagctcaagtttcagcacaaact
ccatcgcaagttcctgcacaagttccacctcgaatttcagcagaagctccatcacaaatt
ctggcatctgctgacgcctatggtcaagctgcatctaatttaattgaggggagtaatctt
gagcagatggttggtcaattgatggagatgggtggtggtaactgggatagagagacagtt
ttgcttgcacttcgtgttgcttacaacaacccagagcgtgctgtggaatacttgtattct
ggtatcccagcaacagcagaaattgcagttccagttgatcctttcccttcatctcaggca
tttgctcaaggggctgattcaactgatttagctgctccaggtcatccctctggtgcacca
aattcctctcctttgaatatgtttccacagggcaatattaatactggagtgggtactggt
ggtggatctctcgacttcctgagaaataaccaacagttcttagctctgcgggcaatggtt
caagcaaatccacagattttacagccaatgcttcaggaactaagcaagcaaaatcctcaa
cttttaagattgatacaagagcatcatgcagagtttcttcagttaataaatgaacctatt
gaagggtttgaaggggacatgtttgatcaggctgatcaagatgagatgccgcataccata
aatgtgacagctgaggaacaggaggcaatccgaagacttgaagcaatgggatttgaccga
gcacgcgttatcgaagcattcctagcttgcgacaagaatgagcagttggcagcaaactat
ttattggaacatgctggtgatgaagattga
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