Mannheimia varigena USDA-ARS-USMARC-1388: X875_9220
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Entry
X875_9220 CDS
T03029
Name
(GenBank) ATP-binding/permease protein CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X875_9220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mve02000
]
X875_9220
Transporters [BR:
mve02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
X875_9220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
SfLAP
DUF87
AAA_29
AAA_18
DEAD
ECH_2
AAA_23
RsgA_GTPase
AAA_16
Sigma54_activat
G-alpha
MMR_HSR1
ATP-synt_ab
DUF5906
Motif
Other DBs
NCBI-ProteinID:
AHG79540
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All DBs
Position
960980..962647
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AA seq
555 aa
AA seq
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MKSLFPFFSLYQTHFGRLLLGIVLAILGLAASIGLLSLSGWFLAASFLVANAIIFNFFYP
AGGVRGLAIFRTASRYFEKLVTHDATFRVLANLRVTVFKKLIPLSPSGLNRFRNSELLNR
LVADVDTLDTLYLNLISPFVSAVMIITFVAIGLSFVSVPLMLIICGTLLALLLIIPTVFY
RLGLKLGKKAVQSRANYRSQFIEWVQLNAEFLLFGNLRQAAEKLQHTEREWLNAQGQESR
LSGLSSGLLMLSNGILTCVVIYLASTAINVPTAQYPEALIALVVFCVMASAEILTPIGIA
FLHLGQVITAAERINQITEQQPNVQFNGSAKWQTLSQNQPLVRFENVNFAYLNGEQQVLN
NLSFEVLKGQKVAILGKTGSGKSTIFQLLNRNYDPTSGQIWLNNCKIEDFPEQTLRSKLV
TLSQRVHIFSQTLKDNLLMGNATATDEQMIGVVQKVGLGYLLETEGLKLWLGEGGRPLSG
GEQRRLGLARLLLSSAELVLLDEPTEGLDRETEQQILNLILTHCAERTLLMITHRQSGLD
KFDVVYRMDSGRLLN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctgttcccattcttttctctctaccaaacgcatttcgggcgtttgctccta
ggtattgtgctggcaattttaggtttggctgccagcattggcttgttgagtttatccggc
tggttcttagcggcttcctttttagtcgccaatgcgatcatttttaactttttctaccca
gcaggtggcgtgaggggcttggcgattttccgcaccgcttcacgctattttgaaaaattg
gttacgcacgatgccaccttccgagtgttggcaaacttgcgtgtgacggtatttaaaaaa
ctgattccacttagcccaagcggtctaaatcgtttcagaaatagtgaattgttgaaccgt
ttagtagcagatgtagacaccctcgataccctttatcttaacctgatttctccttttgtc
agtgcggtgatgatcatcacttttgtggcaatcgggttgtcgtttgtttctgtaccgtta
atgctgattatttgtggcacgctgttggcgttgctgctgattattcctacggttttttat
cgactagggctgaagctcggcaaaaaagcggtgcaaagccgagccaattaccgcagccaa
tttattgagtgggtgcaactgaatgcggaatttttgctgtttggtaatttacgccaagcg
gctgagaaattacaacataccgagcgagagtggctgaatgcacaaggtcaggaaagccga
ctttccgggctttcaagcggtttattaatgctttcaaatggtattttaacttgtgttgtg
atctatttagcttctaccgcaattaatgtgccaaccgctcaatatcctgaagccttaata
gcgttagtggttttctgtgtaatggcatcggctgaaatacttacgccaatcggcattgcg
tttttacatttagggcaagtgattactgcggcagaacgtattaatcaaataactgaacag
cagcccaatgtgcaatttaacggttcggcaaaatggcaaactttgagccaaaatcaaccg
cttgtacgttttgaaaatgtgaattttgcgtatttgaatggtgagcagcaggtattaaat
aatctctcttttgaagtattaaaagggcaaaaagttgcaattttaggcaaaacagggagc
ggaaaatctaccattttccaattattaaatcgtaactatgacccaacaagcggtcaaatt
tggctaaataattgcaaaattgaagatttcccagagcaaaccttacgctcaaaattagtt
acacttagccaacgagtgcatatttttagccaaacgctcaaagataatttattaatgggc
aatgcaactgcgaccgatgaacagatgattggtgtcgttcaaaaagtgggtttaggttac
ttactcgaaacagaaggattaaaactttggctcggcgagggtggaagaccgctttccggc
ggtgaacaacgccgtttagggcttgcccgtttgctattaagttcagccgaattagtgtta
ctagatgaaccaaccgaagggctagatcgtgaaaccgagcagcagatcttaaatctcatt
ctaacccactgtgcagaaagaacattgctgatgattacccacaggcaaagtggcttagat
aaatttgatgtagtttatcgaatggatagtggaaggttgttgaattaa
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