KEGG   Mannheimia varigena USDA-ARS-USMARC-1388: X875_9220
Entry
X875_9220         CDS       T03029                                 
Name
(GenBank) ATP-binding/permease protein CydC
  KO
K16012  ATP-binding cassette, subfamily C, bacterial CydC
Organism
mve  Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:mve00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    X875_9220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mve02000]
    X875_9220
Transporters [BR:mve02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC-BAC subgroup
    X875_9220
SSDB
Motif
Pfam: ABC_tran ABC_membrane AAA_21 SMC_N SfLAP DUF87 AAA_29 AAA_18 DEAD ECH_2 AAA_23 RsgA_GTPase AAA_16 Sigma54_activat G-alpha MMR_HSR1 ATP-synt_ab DUF5906
Other DBs
NCBI-ProteinID: AHG79540
LinkDB
Position
960980..962647
AA seq 555 aa
MKSLFPFFSLYQTHFGRLLLGIVLAILGLAASIGLLSLSGWFLAASFLVANAIIFNFFYP
AGGVRGLAIFRTASRYFEKLVTHDATFRVLANLRVTVFKKLIPLSPSGLNRFRNSELLNR
LVADVDTLDTLYLNLISPFVSAVMIITFVAIGLSFVSVPLMLIICGTLLALLLIIPTVFY
RLGLKLGKKAVQSRANYRSQFIEWVQLNAEFLLFGNLRQAAEKLQHTEREWLNAQGQESR
LSGLSSGLLMLSNGILTCVVIYLASTAINVPTAQYPEALIALVVFCVMASAEILTPIGIA
FLHLGQVITAAERINQITEQQPNVQFNGSAKWQTLSQNQPLVRFENVNFAYLNGEQQVLN
NLSFEVLKGQKVAILGKTGSGKSTIFQLLNRNYDPTSGQIWLNNCKIEDFPEQTLRSKLV
TLSQRVHIFSQTLKDNLLMGNATATDEQMIGVVQKVGLGYLLETEGLKLWLGEGGRPLSG
GEQRRLGLARLLLSSAELVLLDEPTEGLDRETEQQILNLILTHCAERTLLMITHRQSGLD
KFDVVYRMDSGRLLN
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatcgctgttcccattcttttctctctaccaaacgcatttcgggcgtttgctccta
ggtattgtgctggcaattttaggtttggctgccagcattggcttgttgagtttatccggc
tggttcttagcggcttcctttttagtcgccaatgcgatcatttttaactttttctaccca
gcaggtggcgtgaggggcttggcgattttccgcaccgcttcacgctattttgaaaaattg
gttacgcacgatgccaccttccgagtgttggcaaacttgcgtgtgacggtatttaaaaaa
ctgattccacttagcccaagcggtctaaatcgtttcagaaatagtgaattgttgaaccgt
ttagtagcagatgtagacaccctcgataccctttatcttaacctgatttctccttttgtc
agtgcggtgatgatcatcacttttgtggcaatcgggttgtcgtttgtttctgtaccgtta
atgctgattatttgtggcacgctgttggcgttgctgctgattattcctacggttttttat
cgactagggctgaagctcggcaaaaaagcggtgcaaagccgagccaattaccgcagccaa
tttattgagtgggtgcaactgaatgcggaatttttgctgtttggtaatttacgccaagcg
gctgagaaattacaacataccgagcgagagtggctgaatgcacaaggtcaggaaagccga
ctttccgggctttcaagcggtttattaatgctttcaaatggtattttaacttgtgttgtg
atctatttagcttctaccgcaattaatgtgccaaccgctcaatatcctgaagccttaata
gcgttagtggttttctgtgtaatggcatcggctgaaatacttacgccaatcggcattgcg
tttttacatttagggcaagtgattactgcggcagaacgtattaatcaaataactgaacag
cagcccaatgtgcaatttaacggttcggcaaaatggcaaactttgagccaaaatcaaccg
cttgtacgttttgaaaatgtgaattttgcgtatttgaatggtgagcagcaggtattaaat
aatctctcttttgaagtattaaaagggcaaaaagttgcaattttaggcaaaacagggagc
ggaaaatctaccattttccaattattaaatcgtaactatgacccaacaagcggtcaaatt
tggctaaataattgcaaaattgaagatttcccagagcaaaccttacgctcaaaattagtt
acacttagccaacgagtgcatatttttagccaaacgctcaaagataatttattaatgggc
aatgcaactgcgaccgatgaacagatgattggtgtcgttcaaaaagtgggtttaggttac
ttactcgaaacagaaggattaaaactttggctcggcgagggtggaagaccgctttccggc
ggtgaacaacgccgtttagggcttgcccgtttgctattaagttcagccgaattagtgtta
ctagatgaaccaaccgaagggctagatcgtgaaaccgagcagcagatcttaaatctcatt
ctaacccactgtgcagaaagaacattgctgatgattacccacaggcaaagtggcttagat
aaatttgatgtagtttatcgaatggatagtggaaggttgttgaattaa

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