Mannheimia varigena USDA-ARS-USMARC-1312: X874_13910
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Entry
X874_13910 CDS
T03028
Name
(GenBank) Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X874_13910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvg02000
]
X874_13910
Transporters [BR:
mvg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
X874_13910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHG78026
LinkDB
All DBs
Position
complement(1502018..1503571)
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AA seq
517 aa
AA seq
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MFMLKVLQVVKIAKKFTKMTACVLLITSCDKLNSPKPVSQSPTETQPSSSKLKRAIYSAV
FQLDPHKVKVSADAAPLRDLLIGLMAYNVKGNVVPAIAQNWFTEDEKSWLFILDDKATWS
NGKAVIAQDFVASWQRLIDPTAHSLLAKYLVYMGVENAKAITEQQKPVSELGVVALNDHT
LQIRLNQPNRQLPEMLAHVALLPTYQGKIPNTTDFISNGVYQIKQIADKKLVLQARSEDV
AFQTVEYNLITTIQNYSPFDIVENPLSSQKTNVVKLPRLCSYYYEFNFNDEQLSKKEVRE
ALRAMVASANIGQAYGVPSQSVIPHNLVKDREKQWQPIIVEKLLTKAGVSLHNPLKLTLL
YDDSEMNSNIANQITRTLSQSELFNITPRPVDWQTANNLREQKDYQLIRSGWCADYPDPL
IFLQKFHSASPDNHSGYKNDLVDEKLNQLQAETLNQEQRSLLIKEINDQLYSDVVVLPLF
QYQNRVGVVSSLWGIDLSNDSEVIYSKDLKRISEQKD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgttaaaagttttacaagtggttaaaattgcaaaaaaattcacaaaaatgacc
gcttgcgttttgctgattacctcttgtgataaattaaatagtccgaaaccagtttcgcag
tcacctaccgagacccaaccaagtagctctaaacttaagcgtgctatctattctgcagtt
tttcagcttgatccgcataaagttaaagtttccgctgatgctgcacctctacgagatcta
ttaatcggtttaatggcatacaacgtaaaaggtaatgttgtaccagctattgcacaaaat
tggtttactgaagatgaaaaatcgtggttatttattttagacgataaagccacttggtcg
aacggtaaagctgttatcgcacaagattttgtggcgagttggcaacgtttgattgaccca
acagctcattcgttgttggcaaaatatctggtttatatgggggttgaaaatgccaaagcg
attacagagcaacaaaagcctgtgtcagaattaggggtagtagcattaaatgatcatacg
ctacaaattcgccttaaccagccaaatcgtcaattgccagaaatgttggcacacgtcgca
ttactgccgacttatcaaggtaaaatccctaatactacagattttattagcaatggagtt
taccaaatcaaacaaatagcggataaaaaacttgttctgcaagcgcgttctgaagatgta
gcgtttcaaaccgtcgagtacaatttaattacgactattcaaaattattcgccatttgat
attgtggaaaatccgctatcaagccagaaaactaatgtagttaagcttcctcgtttatgt
tcatattattatgaatttaattttaacgacgaacagcttagtaagaaagaagttcgtgaa
gcattaagagcaatggttgcttcggcaaatattgggcaagcttatggggttccaagccag
tcggttattccacataatttagtaaaagatcgagaaaaacaatggcagccaatcattgtt
gagaagctgttaacgaaagcaggcgtgagtttgcataatcctttaaaactcacgttgtta
tatgatgatagtgagatgaatagtaatattgcaaaccagattactcgcacattatcacaa
tcagaactgtttaatatcacgcctagaccggtggattggcagacggctaacaatttacgt
gagcagaaagattatcagttaatacgctccggttggtgtgccgattaccctgatccgctc
atctttttacagaaatttcattcagcaagcccggataatcactccggttataaaaacgat
ttagttgatgaaaagttaaatcaattacaagcagaaacgctaaaccaagagcaacgctca
ctattgattaaggagattaacgaccagctttatagtgatgttgtggtattaccgttattt
cagtatcaaaaccgagtaggcgtagtttcctccctttggggtattgatttaagtaacgat
agcgaagtaatttatagcaaggatttaaaacgaatttcagaacaaaaggattaa
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