Mannheimia varigena USDA-ARS-USMARC-1312: X874_15710
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Entry
X874_15710 CDS
T03028
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg03030
DNA replication
mvg03430
Mismatch repair
mvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X874_15710
03430 Mismatch repair
X874_15710
03440 Homologous recombination
X874_15710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvg03032
]
X874_15710
03400 DNA repair and recombination proteins [BR:
mvg03400
]
X874_15710
Enzymes [BR:
mvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X874_15710
DNA replication proteins [BR:
mvg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X874_15710
DNA repair and recombination proteins [BR:
mvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X874_15710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AHG78205
LinkDB
All DBs
Position
1698203..1699306
Genome browser
AA seq
367 aa
AA seq
DB search
MQITITRDQLLKPLQQVCGVLSSRPTLPVINNILLEIEGDRLSLTGTDLEVELTTQAQLL
QAVDFAGKFTIPAKKFLDISKSLPDDSVISVEFEEDKAIIKAGRSKFSLATLPASDYPNL
MDWKPEVDFSIEQSTLARLIDATQFSMANQDARYFLNGMKFETEGNLLRTVATDGHRLAV
CTMVLNQELLTHSVIVPRKAVLELSRLVSANNEAVRLEIGSNNIRITMNGIVFTSKLIDG
RFPDYRRVLPRNADRILEADTETLKRALMRAAILSNEKFRGVRLTLSNNLLKITANNPEQ
EEAEEIIDVAYDSPEMEVGFNVSYVLDVLNTLKCQRVRFSLVDSSSSCLIEDCDNSSAEY
VIMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattacgattactagagaccaattactcaagcctttacagcaggtatgtggcgta
ttaagcagtcgcccgaccttgcctgttattaataatattttattagaaattgaaggcgat
cgtttatctcttacaggaaccgatttagaagttgaattaaccacccaagctcaactacta
caagcggtcgattttgcaggaaaatttaccattccagctaaaaaattcttagatatcagc
aaaagtttaccagacgatagcgtgatctcagttgagtttgaggaagataaagcgatcatc
aaagcagggcgtagtaaatttagcttagccactttacccgccagcgattaccctaattta
atggattggaagcctgaggtggatttttccattgagcaatcaacgcttgcccgtctcatt
gatgcaacacaattctcaatggcaaaccaagatgcacgttatttcttaaacggtatgaag
tttgaaaccgaaggtaatttattacgcactgttgccacagacggacaccgtttagcggtt
tgtacaatggtattaaaccaagagcttttaacccattcggttatcgtgccacgtaaagca
gtgcttgaactttcacgccttgtatctgcaaacaatgaagcagtgcgtttagagatcggc
tcgaataacatccgcattacaatgaacggtattgtgtttacctctaaattgattgacggt
agattcccagactatcgccgtgtgctacctcgtaatgcagaccgtattttagaagcagat
accgaaacgctaaaacgtgcgttaatgcgagcggctattctttcaaacgagaaattcaga
ggcgtgcgtttaacgctaagcaataacctacttaaaattaccgccaataacccggagcaa
gaagaagcagaagaaattattgatgttgcctacgacagtccggaaatggaagttggcttt
aatgtcagctacgtgctagatgttctcaatacgctaaaatgccaacgagtacgcttcagc
ctcgtcgattccagctcaagctgcttaattgaagattgcgacaatagttcggcggaatat
gtgattatgccgatgcggttataa
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