Mannheimia varigena USDA-ARS-USMARC-1296: X808_5200
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Entry
X808_5200 CDS
T03027
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi03030
DNA replication
mvi03430
Mismatch repair
mvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X808_5200
03430 Mismatch repair
X808_5200
03440 Homologous recombination
X808_5200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvi03032
]
X808_5200
03400 DNA repair and recombination proteins [BR:
mvi03400
]
X808_5200
Enzymes [BR:
mvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X808_5200
DNA replication proteins [BR:
mvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X808_5200
DNA repair and recombination proteins [BR:
mvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X808_5200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
AHG75043
UniProt:
W0QCT8
LinkDB
All DBs
Position
complement(563041..563820)
Genome browser
AA seq
259 aa
AA seq
DB search
MTEEKIIRQVVLDTETTGMNMAGGPPQIGHNIIEIGAVEVINRRLTGRTYHVYIKPPRNV
DEEAIAVHGITNEFLQDKPVFADIADEFLDFIKGAELIIHNAPFDVAFMDQEFSYLPNPP
AKTSEMCTVTDSLQMARKMYPGKRNNLDALCDRLGIDNSKRVLHGALLDAEILADVFLMM
TGGQISLLGEEEEVETTSAVVDSEEEFSAITLNADDAIILKANTEEEESHLALLKLIEKK
SKGNCLWTKAMTEESEILN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaaaaaattattcgccaagtggttctggatactgaaaccacaggaatgaat
atggcaggtggaccgccacaaattgggcataatattatcgaaatcggagcggttgaagtg
attaaccgccgtttgaccgggagaacttatcacgtttatatcaagccacctcgtaacgtg
gatgaagaagcgattgcggttcacggtattactaatgaatttttgcaggacaagcctgtt
tttgccgatattgctgatgagtttttagacttcatcaaaggggctgaattaattatccat
aatgcccccttcgacgtagcatttatggatcaggaattttcttatctgcctaatccgcca
gcgaaaacatctgaaatgtgtacagttaccgatagcttacaaatggcacgtaagatgtat
ccgggtaagcgaaataatttagatgctttgtgtgatcgtttaggcattgataacagcaag
cgtgtacttcacggagctttactggatgctgagattctcgccgatgttttcttgatgatg
accggcgggcaaatttcattattaggcgaagaagaagaagtagaaacgacatcggctgtt
gtcgatagtgaagaagaattttcagcaattacactaaatgcagatgatgctattattctt
aaagccaatactgaagaggaagaatcgcatttggcattattaaagctgattgaaaagaaa
tcgaaaggtaattgtctttggacaaaagcaatgactgaagaatcggaaatcttaaattaa
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