Mannheimia varigena USDA-ARS-USMARC-1296: X808_8080
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Entry
X808_8080 CDS
T03027
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi03030
DNA replication
mvi03430
Mismatch repair
mvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X808_8080
03430 Mismatch repair
X808_8080
03440 Homologous recombination
X808_8080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvi03032
]
X808_8080
03400 DNA repair and recombination proteins [BR:
mvi03400
]
X808_8080
Enzymes [BR:
mvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X808_8080
DNA replication proteins [BR:
mvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X808_8080
DNA repair and recombination proteins [BR:
mvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X808_8080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DUF4388
TIG_plexin
Blo-t-5
Motif
Other DBs
NCBI-ProteinID:
AHG75331
UniProt:
W0Q9X5
LinkDB
All DBs
Position
complement(856918..857940)
Genome browser
AA seq
340 aa
AA seq
DB search
MQKIFPETLQLSLNKGLQPFYLLTGNDLLLINESKDLIIQSARSNGFDEKKEIDVKNDTN
WEALFEAAQEMGLFFTRQILILNFPESPTATQFKKLAELCALVHSDLLFILHLPKFLKTM
EKQAWFTQIEPQLVQVNCQTPEISKLPQWLSNRAKEMNLQIEFEANQLLCYSYEGNLLAL
KQALQLLQLQCNDGKITLNRAKEVVENSAQFTPFQWIDALFEGKIGRAQRILHHLQNEEV
QAVVLLRIVQKELMILLEITRSPTPILSEQVLFNGNLRTEFDRLKIWQNRRPFYSQVVQR
LTYKKLYALIQQLAELERKVKQEFSDDIWQELERFSAQFT
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcttcccagaaacacttcaattatctttaaacaaaggattacaacccttt
tatttattaacagggaatgatttgctcttgattaatgaatccaaagacttgattattcaa
tctgctcgctcaaacggatttgatgaaaaaaaagagattgacgtaaaaaatgacacaaat
tgggaagctctttttgaagcagctcaagagatggggctattttttacacgccaaattctt
attctcaattttcctgaatcaccaacagctacgcagtttaaaaagctcgccgaactctgt
gctttagtgcattccgatctgctctttattctccatttaccaaaatttttaaaaacaatg
gaaaagcaggcttggtttactcaaattgagcctcaattagtgcaagttaattgccaaaca
cctgaaattagtaaactaccgcaatggttaagcaatagagcaaaagagatgaatttacaa
attgagtttgaggcaaaccaactgctctgctatagctatgagggaaatctacttgcccta
aaacaagccctacagctattacaacttcaatgtaacgatggcaaaattacacttaaccga
gcaaaagaagtagtagaaaattctgctcaatttactccattccaatggattgatgctctg
tttgaggggaaaatcggacgagctcaacgtattttacatcacttacaaaatgaagaagta
caagcagttgttttattgcgtattgtgcaaaaagagctaatgattttgcttgaaattacc
cgctctccaacgccgatattaagcgaacaagttctctttaatggtaatttacgaacagaa
tttgaccgcttgaagatctggcaaaaccgcagaccgttctatagccaagtagtacaacgt
ttaacttataaaaaactttacgccctaatccaacaacttgctgaattagagcgtaaagta
aaacaagaatttagcgatgatatttggcaagaattagagcgtttttccgctcaatttacc
taa
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