Mannheimia sp. USDA-ARS-USMARC-1261: X781_13750
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Entry
X781_13750 CDS
T03026
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Pathway
mvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X781_13750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvr03019
]
X781_13750
03016 Transfer RNA biogenesis [BR:
mvr03016
]
X781_13750
Enzymes [BR:
mvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
X781_13750
Messenger RNA biogenesis [BR:
mvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
X781_13750
Transfer RNA biogenesis [BR:
mvr03016
]
Prokaryotic type
tRNA degradation factors
X781_13750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
aRib
S1_2
SLS1_KH2
Motif
Other DBs
NCBI-ProteinID:
AHG73523
UniProt:
W0Q8G9
LinkDB
All DBs
Position
1404871..1407021
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AA seq
716 aa
AA seq
DB search
MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
DYQERTYAAGRIPGGFFKREGRPSEGETLVARLIDRPVRPLFPEGFFNEIQVIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQFVLNPTTSEQKISRLDLVVAG
TDKAVLMVESEADILTEEQMLSAVVFGHQQQQVVIENIKEFVKEAGKPRWDWVAPQPNTD
LINKVKALAESRIGDAYRITEKQARYEQIDAIKAEVIAQLTAEDETVSEGAIVDIITSLE
SSVVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGEKSDRFLFHYNFPPFSVGETGRIGSPKRREIGHGRLAKRGVLAVMPTAEEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDDKFVVLSDI
LGDEDHLGDMDFKVAGTRNGVTALQMDIKIEGITPEIMQIALNQAKGARMHILSVMEQAI
PAPRSDISDYAPRIHTMKIDPKKIKDVIGKGGATIRALTEETNTSIDIDDDGTVKIAATD
GNAAKAVMARIEEIVAEVEVNQIYNGKVTRVVDFGAFVSILGGKEGLVHISQITNERVER
VADYLQVGQEVQVKVVEIDRQGRIRLTMKDLNSTNSEVNAEETVSEEVVATEQENI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgactccaattgttaaacaatttaaatacggtcagcataccgtaacattagaaacaggt
gctatcgcacgtcaagcaaccgcagccgtaatggcaagtatggacgacactacagtattc
gtgactgtagtggctaaaaaagatgtgaaagaaggtcaagatttcttcccattaacagtg
gattaccaagagcgtacttacgcggcaggtcgcatcccgggtggtttcttcaaacgtgaa
ggtcgtccatctgaaggcgaaactttagttgctcgtttaatcgaccgccctgttcgtcca
ctattcccagaaggtttcttcaatgaaatccaagtgattgcaactgtggtttcggtaaac
ccacaaatcagcccggacttagtggcaatgattggtgcatcagcagcattatcattatca
ggagtgccgttcaacggtcctatcggtgcagctcgtgtcggtttcattaacgatcaattc
gtgttaaacccaaccacatcagaacaaaaaatcagccgtttagatttagtggttgcaggt
acagataaagccgtattaatggtggaatctgaagcggacattttaactgaagagcaaatg
ctttcagcggtagtattcggtcatcagcaacaacaagtagtgattgagaacatcaaagaa
ttcgtaaaagaagctggcaaaccacgttgggattgggttgctccacaaccaaatactgat
ttaatcaataaagtgaaagccttagcagaaagccgcattggcgatgcttatcgcattact
gaaaaacaagcacgttacgagcaaattgatgcaattaaagcggaagtaatagctcaatta
acggctgaggatgaaacagtgagcgaaggtgctatcgttgatattattacttcattagaa
agttctgtagtgcgtagccgtattattgcaggcgaaccacgtattgatggtcgtacggta
gatactgtgcgtgcgttagatatttgtacaggcgtattacctcgtactcacggttctgca
atcttcactcgtggcgaaactcaagcattagcggttgcaacgcttggtacagaacgcgat
gctcaaatcatcgatgaattaacgggtgaaaaatcagaccgtttcttattccactacaac
ttccctccattctctgtgggtgaaacaggtcgtatcggttcaccaaaacgccgtgaaatc
gggcacggtcgtttagcaaaacgtggtgtgttagcggtaatgccaaccgctgaagagttc
ccgtatgtagtacgtgtagtttctgaaatcactgaatcaaacggttcatcttcaatggca
tctgtttgtggtgcatctcttgcgttaatggatgctggcgtgccaattaaagcagctgtt
gcaggtatcgcaatgggcttagtgaaagaagatgataaattcgtggttctttcagatatc
ttaggtgatgaagaccacttaggcgatatggacttcaaagtagccggtactcgcaatggt
gttacggcactacaaatggatattaaaattgaaggtatcacaccggaaattatgcaaatt
gcgttaaaccaagcaaaaggtgctcgtatgcacattttaagcgtaatggaacaagcaatt
cctgctccacgctcagatatttctgactacgctccacgtattcacacgatgaagatcgat
ccgaagaaaatcaaagatgtaattggtaaaggtggtgcaactatccgtgcattaactgaa
gaaaccaatacttcaattgatattgatgatgacggtacagtgaaaattgccgcaactgac
ggcaacgcagcgaaagcagtaatggctcgtatcgaagaaattgtagcagaagtggaagta
aaccaaatctacaacggtaaagtaacccgtgttgttgatttcggtgcatttgtgtcaatt
ttaggcggtaaagagggcttagttcacatttcacaaattactaacgagcgtgtagagcgt
gtagcggattacctgcaagttggtcaagaagtacaagtgaaggtggtagagatcgaccgt
caaggtcgcatccgcttaacaatgaaagatcttaacagcacaaattcagaagtgaatgca
gaagaaactgtatctgaagaggttgtagcaacagaacaagaaaatatctag
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