KEGG   Myotis brandtii (Brandt's bat): 102241403Help
Entry
102241403         CDS       T02920                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
myb  Myotis brandtii (Brandt's bat)
Pathway
myb03410  Base excision repair
Module
myb_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:myb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102241403 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:myb03400]
    102241403 (LIG3)
Enzymes [BR:myb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102241403 (LIG3)
DNA repair and recombination proteins [BR:myb03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     102241403 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 102241403
NCBI-ProteinID: XP_005860266
LinkDB All DBs
Position
Un
AA seq 1011 aa AA seqDB search
MTLAFKILFPPTFRVLSRKEVRLFRKHLWPDVKQFSQWSETGWLPGRCLLQKRKPILSFQ
KGNLRPRATCLAFLPGSHVGLSSGPCEMAEQRFCVDYAKRSTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQH
IADLSSKAAGTPKKKAVVQAKLTATGQVTSPVKGASSVTNTNPRKFSGFSAKPNNSGEAC
SSPTLKTSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNSKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKEPGRRRALSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKDGDHFSYFSRSLKPVLPHKVAH
FKEYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVSKASDLVDMINRVIREGLEGLVLK
DAKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSS
QKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFTV
VAGNEGSSTAGGNSGENEGTSGPAVPQKARTSPKQSSPSAKKAGGKLHHPNSKNGHKPTA
KPSPVKMGEKLVTKSPVKVGEKRKASDETPCHAKVLLDIFTGVRLYLPPSTPDFSRLRRY
FVAFDGDLVQEFDMASATHVLGSRDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq 3036 nt NT seq  +upstreamnt  +downstreamnt
atgactttggctttcaagatcctcttcccaccaaccttccgtgtactcagccgaaaagaa
gtgcgcctattccgaaaacatctctggccagacgtaaaacaattcagccagtggtcagaa
acaggttggcttcctgggcgctgcctcctccagaaaagaaagcccattctgtcatttcaa
aaaggcaatctaagaccacgtgcgacctgccttgccttcttgccagggtcgcatgtggga
ctctccagcgggccctgtgagatggccgagcaacggttctgtgtggactatgccaagcgt
agcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggtgtatgccgaatcggc
aaagtggtgcccaatcccttctcagagtccgggggtgatatgaaagagtggtaccacata
aaatgcatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaggacctc
acagagctggaaggctgggaagagctggaagataatgagaaggaacagataagccagcac
attgcagatctgtcttctaaagcagcaggcacaccaaagaagaaagccgttgtccaggcg
aagctgacagccacgggccaggtgacatctccagtgaaaggtgcttcatctgttaccaat
accaatccccggaagttttctggcttttcagccaagcccaacaactctggggaagcctgc
tcaagtcccacccttaagacaagtctgtcctcaagcaaatgtgaccccaaacacaaggat
tgtctgctacgtgagtttcggaagttgtgcgccatggtggctgaaaatcctagctacaat
tcaaagacccagatcatccaggactttcttcggaaaggctcagctggagatggtttccac
ggtgacgtgtacctaacggtgaagctgctgctgccgggtgttattaagagcgtttacaac
ttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcagcccagatgat
atggcacgagacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcag
agcaagtctttccccccagctgccaagagccttctcaccatccaggaggtggacgaattc
ctcctgcggctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggacatt
gcctccaggtgtacagccaatgaccttaaatgcatcatcaggttgatcaaacatgatctg
aagatgaactcaggtgcaaaacatgtgttagacgccctcgaccccaatgcctatgaagcc
ttcaaagcctcgcgcaacctgcaggacgtggtggagcgggtcctccacaatgagcaggag
gtggagaaagagccaggccggagacgagctctgagcgttcaggcctcactgatgaccccg
gtgcagcccatgctggccgaggcctgcaagtccattgagtatgcgatgaagaagtgtcct
aacggcatgtactctgagatcaagtatgatggggagcgagtccaggtgcataaggacgga
gatcacttcagctacttcagccgcagtctcaagcccgtcctacctcacaaggtggcccac
tttaaggaatacatcccccaagctttccctgggggccacagcatgatcttggactctgag
gtgctcctgatcgacaacaagacaggcaaaccattgccctttgggacgctgggcgtgcac
aagaaagcggccttccaggatgctaatgtctgcttgtttgtttttgattgtatctacttc
aatgatgtcagcttgatggacaggcctctgtgtgaacggcggaagtttcttcatgataac
atggttgaaattcccaaccggatcatgttctcagaaatgaagcaagtttcgaaagcatcc
gacttggttgacatgataaaccgggtgatccgagagggcctggaagggctggtgctgaag
gacgcaaagggtacatatgagcctggaaagcggcactggctgaaagtgaagaaagactat
ctgaatgagggggccatggctgacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccaagcagc
cagaagtggtgcacagtcaccaagtgttcaggaggccatgatgatgcgacgctcgcccgc
ctgcagaaggagctggacatggtgaagatcagcaaggatcccagcaagatacccagctgg
ctgaaaatcaacaagatctactatcccgacttcatcgtcccagacccgaagaaagctgcc
gtttgggagatcacaggggctgaattctccaaatccgaggctcacactgccgacgggatc
tccatccggttccctcgctgcacccgaatccgggatgataaggactggaaatctgccacc
aacctcccccaactcaaggaactgtaccagctgtccaaggagagggcggacttcactgtg
gtcgctggcaacgaagggagctccactgcagggggcaacagcggggagaatgagggcacc
tcagggcctgctgtgcctcagaaggccaggacctcccccaagcagtcctcccccagtgcc
aagaaggcaggagggaagctgcatcaccccaacagcaaaaatggccacaagccgactgca
aagccttcccctgtgaaaatgggggagaagctggtcacgaagtctcctgtgaaagtgggg
gagaagcggaaggcttctgatgagactccgtgccacgcaaaggtgctgctggacatcttc
actggagtgcggctctacctgccgccctccacaccagacttcagccgtctcaggcgctac
tttgtggcatttgatggggacctggtacaggaatttgacatggcctcagccacacatgtg
ctgggtagcagggacaagaaccctgaggcccagcaggtctccccagagtggatttgggca
tgtatccggaaacgaagactggtggctccctgctag

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