KEGG   Myotis brandtii (Brandt's bat): 102245604Help
Entry
102245604         CDS       T02920                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
myb  Myotis brandtii (Brandt's bat)
Pathway
myb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:myb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    102245604 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:myb03400]
    102245604 (LIG4)
Enzymes [BR:myb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102245604 (LIG4)
DNA repair and recombination proteins [BR:myb03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     102245604 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV BRCT DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme LIG3_BRCT
Motif
Other DBs
NCBI-GeneID: 102245604
NCBI-ProteinID: XP_005884535
LinkDB All DBs
Position
Un
AA seq 994 aa AA seqDB search
MLRVATEPAREHLASRLRSCGVRFGSGTRGFGSERSFVGRTPQSTERASGGVRAGGGWAR
VTKAGGGHLASSRVEPEDSPIASMAASQTSQTVASHVPFADLCSTLERIQRSKGRADKIR
HFREFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELL
NLPKDGKDALKLLNYRTPTGIRGDAGDFAMIAYFVLKPRCLQKGSLTIQQVNDILDSVAT
NNSAKRKDLVKKSLLQLITQSSALEQKWLIRMIVKDLKLGFSQQTVFSLFHNDAAELHNV
TTDLEKVCRQLHDPSVGLSDISITLFSPFKPMLAAIADIGRIEKDMKNQSFYIETKLDGE
RMQMHKDGDVYAYFSRNGYKYTEQFGASPQEGSLTPFIHNAFRTDIQICILDGEMMAYNP
NTQTFMQKGNKFDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPVP
GRIEIVEKTQAHTNKEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNG
LMDELDIIIVGGYWGKGARGGMMSHFLCAVAEKHASGEKPSVFHTLCRIGSGYTMKELYD
LGLKLAKHWKSFHKKAPPSSILFGTEKPEVYIEPCNSVIVQIKASEIVPSDMYKTGCTLR
FPRIEKIREDKEWHECMTLDDLEQLRGKASGKLASKHLYVGGDDEPQVKKRKAPSKIKKV
IGIIEHLKAPNLSNVNKVSNIFEDVEFCVMSGINGHPKPDLENRIAEFGGYIVQNPGPDT
YCVIAGSENIRVKNIISSNKHDVVKPEWLLECFKTKSCVPWQPHFMIHMCPSTKQHFARE
YDCYGDSYFVDTDLNQLKEVFSGIKDSSEQTPKEMASVIADLEYRYSWDCSPLNMFRNHT
IYLDLYTVINDLNTKIEGTRLAITALELRFHGAEVVSCLAKGVSHVIIGEDHSRVADFKA
FRRTLKRKFKILQEGWVIDSIDKCELQDENQYLV
NT seq 2985 nt NT seq  +upstreamnt  +downstreamnt
atgctgcgggtggcgactgagcctgcgcgggagcatttggcgagccggcttcgcagttgc
ggcgtcaggtttggcagcggtaccagaggcttcgggtcagagaggagttttgtggggcgg
accccgcagtccacggagagagccagcggtggagtccgggccggcggaggctgggccaga
gtgaccaaagcaggagggggccatcttgcgtccagcagagttgaaccagaggattcaccc
atcgcttctatggctgcctcacaaacttcacaaactgttgcatctcacgttccttttgca
gatttatgttcaactttagaacgaatacagagaagtaaaggacgtgcagataaaatcaga
cacttcagggaatttttagattcttggagaaaatttcatgatgcccttcataagaaccag
aaagatgtcacagactctttttatcctgcaatgagacttattcttcctcagctagaaaga
gagagaatggcctatggaatcaaagaaacaatgcttgctaagctttatattgaattgctc
aatttacctaaagatggaaaagatgctcttaaacttttaaattacaggacacctactgga
attcgcggagatgctggagactttgccatgattgcatactttgtattgaaaccaagatgt
ttacagaaaggaagtctaaccatccagcaagtaaatgacattttggattcagttgccacc
aataattctgccaaaagaaaggacctagtaaagaagagtcttcttcagctaataactcag
agttcagcacttgaacaaaagtggctaatacgaatgattgtgaaggacttaaagctgggt
tttagtcagcaaactgtattttctctttttcataatgatgctgctgagttgcataatgtc
accacagatctggaaaaagtctgtaggcaactgcatgacccttcagtagggctcagtgat
atctctatcactttattctctccctttaaaccaatgctcgctgcaatagcagatattggg
cgaattgagaaggacatgaaaaaccagagtttctatattgaaaccaagctagatggcgag
cgtatgcaaatgcacaaagatggggatgtatatgcatatttctcccgaaatggctataaa
tatacagaacagtttggtgcttctccacaggaaggttctcttacaccattcattcataat
gcattcagaacagatatacagatttgtatccttgatggtgagatgatggcctacaatcct
aatacacaaacttttatgcaaaaggggaataagtttgatattaaaagaatggtagaagat
tctgatctgcaaacttgttactgtgtttttgatgtattgatggtcaataataaaaagcta
ggacatgaaaccctgagaaagagatacgaaattcttagtagtatttttacaccagtacca
ggcagaatagaaatagtggaaaaaacacaagctcatactaataaagaagtaattgatgct
ctgaatgaagcaatagataaaagagaagagggaatcatgataaaacatcctctatccatt
tataagccagacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtaaatggc
ctcatggatgaactggacatcataattgtcgggggctattggggtaaaggtgcacggggt
ggaatgatgtctcattttttgtgtgctgtcgcagagaagcacgcttctggtgaaaaacca
tcagtgttccatactctctgtcgtattggctcaggttacaccatgaaagaactgtatgat
ctgggtttgaaactggccaagcattggaagtcttttcataaaaaagctccaccaagtagc
attttatttggaacagagaagccagaagtgtacattgagccttgtaattctgtcatcgtt
cagattaaagcatcagagattgttcccagtgacatgtataaaactggctgcactttgcgt
tttccacgaattgaaaagatcagagaagacaaagagtggcatgagtgcatgactctggat
gacttagaacaacttcgagggaaagcatctggaaagcttgcgtctaaacacctttatgtt
ggtggtgatgatgaaccccaagtaaaaaagcggaaagctccctccaaaattaagaaagtt
attggaattattgagcacttaaaagcacctaacctttctaacgtaaacaaagtttccaat
atatttgaagatgtggagttttgtgttatgagtggaataaatggccatccaaagcctgac
ctggagaacagaattgcagaatttggtggttatatagtacaaaacccaggcccagacaca
tactgtgttattgcagggtctgagaacataagagtgaaaaatataatttcttcaaataaa
catgatgttgtcaagcctgagtggctgttagaatgttttaagaccaaaagctgtgtgcca
tggcagcctcactttatgattcatatgtgcccatcaacaaaacaacattttgcccgtgaa
tatgattgttatggtgatagttattttgttgatacagatttgaaccaactgaaggaagta
ttctcaggaattaaagattctagtgaacagactcctaaagaaatggcctctgtgattgct
gatttagagtatcgatattcctgggactgctctcccctgaatatgtttcgaaatcacacc
atttacttggacttgtatactgttattaatgacttgaataccaaaatcgagggaacaaga
ttagctattacagccttagagcttcgatttcatggagcagaagtagtttcttgtttagct
aagggagtatctcatgtaatcattggggaggatcatagtcgtgttgcagattttaaagct
tttcgaagaactcttaagagaaagtttaaaattctgcaagaaggttgggtaattgattca
atagacaaatgtgagttacaggatgaaaatcaatatttggtttaa

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