KEGG   Mizuhopecten yessoensis (Yesso scallop): 110453222Help
Entry
110453222         CDS       T05079                                 

Definition
(RefSeq) histone deacetylase 6-like isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:myi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:myi01009]
    110453222
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myi03019]
    110453222
   04131 Membrane trafficking [BR:myi04131]
    110453222
   03036 Chromosome and associated proteins [BR:myi03036]
    110453222
Enzymes [BR:myi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110453222
Protein phosphatases and associated proteins [BR:myi01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110453222
Messenger RNA biogenesis [BR:myi03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     110453222
Membrane trafficking [BR:myi04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    110453222
Chromosome and associated proteins [BR:myi03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     110453222
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 110453222
NCBI-ProteinID: XP_021357756
LinkDB All DBs
Position
Unknown
AA seq 1149 aa AA seqDB search
MDDKGIEESEVQTQPADGVSAHVIHRERLERVRRQGRERKRQEEERKKEERRNNQEKPVS
SDSENEDDAYLIEQLTKMGITVKKPEPPEGTGLVYDDRMATFECLWDPAFPEKPERITES
FARCSELGLIERCTRIEAQYGTEDQVLIQHTEAHLEKLKETVDMSKEALKKVSAKYDSIY
IHQATYEASLLALGSTMELMEQILKKKVRNGLAIIRPPGHHAMNEEFCGYCFFNQVAIAA
KHAVDTLGLKRVLIVDWDVHHGQATQQMFYDDPRVLYFSIHRYEYGKYWPNLRESDYDFI
GDGKGKGYNVNVPLNKVHMTDTDYLAIFHQILMPIAHQFSPDLVLVSSGYDAAIGCPEGE
MLVSPVTYAHMTHMLMSLAEGRVCICLEGGYCIKSLSEAVALTLRSLLGDPCPALPAMGD
PSHSITTTILNVIKVLQPYWNCFSYQTELALEESCPYEEVNDMPPKPGMPFVTEENKPKE
YTIMYEYEDGVEEEYIIQHKFDAVIDQLIADTSLAVPPNKTCIVYDEGMRVHHAITFRGH
PEDPDRVTCIFDKHAEWGLLDRCLRVQSRLATDGETQAIHSSSYLEQMQASAELPPMELR
NLQHSFNSIYMCPESNVCARMAAGCVLSVTEAVLSGQAKSGVAVVRPPGHHAECTKAMGF
CFFNSVAIAAKYAQNKFGLKRVLILDWDVHHGNGTQHSFYDDPSILFISLHRFDHGSFYP
TSTDGNHNMTGSGAGKGFNVNIPFNEGPKGDAEYKAAFQQIVMPIAYEFAPELVLVSAGF
DAALGDPLGGYHITPAGYGHMTHMLSSLANGRVVLALEGGYNLSSISNSMATCTSVLLGD
PCPYLPYVQPQESAVKGINNTLDSHKQFWKCLKFRESIPDLRCKEGEGEPEGIEEQKEEE
KFKKNIEELSKKMTSVSVYDRAAQSPEEAKSANKSEPEVTTQATSTNDKDSGSVGDATPT
TSETKPSVTETTPTPSKSSDTMEDQGAVGGAASMAVGGSSVGGAGTPLNEMMGAVGGADN
LLQALTVAQALEDMGVERMYAVQPLTWCPHLQTVQPLPQGILDTRAPCQDCGNEGENWIC
LVCYKVFCSRYVNEHMVIHGATEQHLVTLSFSDLSVWCYGCDNYIDNQVVNAAKRAAHRH
KFGTEMSGS
NT seq 3450 nt NT seq  +upstreamnt  +downstreamnt
atggatgacaaaggaattgaagagtcggaagtccaaacacaacctgctgatggagttagc
gcacatgtaattcaccgagaaagattggagagagtcaggcgacagggaagagaaaggaaa
agacaggaagaggaaagaaagaaggaggaaaggaggaataatcaggaaaaacctgtatcc
tcggacagtgagaatgaggatgatgcctatttgatagaacagcttactaaaatggggatt
actgtgaagaaaccagagcccccggaaggtactggacttgtgtatgatgacagaatggct
acattcgaatgtttatgggacccagctttcccagagaagccagaacgtataacagaatca
tttgcccgatgctctgagctgggacttatagaaagatgtacaagaattgaggcccagtat
ggaacagaggaccaagtgttaatacagcacacagaggcccacctagaaaaactgaaggag
actgtagacatgtctaaagaggctctcaagaaagtttcagctaaatatgactccatttac
atccatcaggcgacatacgaggcctcgctattggccctgggtagtactatggagctcatg
gaacaaattcttaagaaaaaggtcaggaatgggctggcaatcattcgacctccgggccat
catgccatgaatgaagaattctgtggctactgtttcttcaaccaagtggccattgctgcc
aagcatgcagtggacactttaggactcaaaagggtgctcattgtagactgggatgtccat
cacggtcaagcaacacagcaaatgttttatgatgacccaagagttctttacttttccatt
catcgttacgaatatgggaaatattggcctaaccttcgcgaatctgactacgactttatt
ggagatggcaagggcaaagggtacaatgtcaatgtacctcttaacaaggtccacatgacg
gacacagactacctggccatattccatcaaattctaatgcctattgctcatcagttcagc
cctgacctagttttggtgtccagcggttacgatgcagccattggatgtccagagggtgag
atgcttgtgagtccagtgacatacgcccacatgacccatatgctgatgtcattggctgag
gggcgtgtttgtatatgtttggagggcgggtactgtatcaagtctctgtctgaggctgtg
gctctaacactgagaagtctgctgggtgacccctgtcctgccttacctgccatgggggac
ccaagccacagtataacaacgactattttgaatgtgatcaaagttctgcagccgtactgg
aactgcttcagctaccagacagagctagccttggaggaatcatgtccgtatgaagaagtc
aatgatatgccgccaaagccaggtatgccatttgtcacagaggagaacaaaccaaaagag
tacacgataatgtacgagtacgaggatggggtcgaggaggagtacatcatacagcacaag
tttgacgcggtcatcgatcagctgattgctgacacctcactagccgtcccaccaaacaag
acgtgtatagtgtatgatgaaggcatgcgggtccaccatgctatcacgttcagaggacat
cctgaggacccagatcgtgtcacctgtatatttgacaaacatgcggagtggggacttctg
gatcgatgtttacgagttcagtctcggcttgctacggacggagagacacaggccatacac
agttcatcctacttagagcagatgcaagcatcagcagagttacctcccatggaactgaga
aatttgcagcatagcttcaattcaatctacatgtgtccggagagcaatgtgtgtgccaga
atggcggcggggtgtgtcctaagtgttacagaagctgtactgtcaggccaggccaaaagt
ggggtcgctgtcgtcaggcctcctggtcaccatgcagaatgtaccaaagcaatggggttc
tgcttcttcaacagcgtggccattgctgccaagtatgctcaaaacaaatttggattaaaa
cgggtattgattctcgactgggatgttcaccatggtaacggaacacaacacagcttttat
gatgatccaagcatcctcttcattagcttgcaccgttttgaccatggaagtttctatccg
acctccacagatggaaatcacaacatgacaggatctggggccggaaagggatttaatgtc
aacattcctttcaatgagggtcccaaaggtgatgcagagtacaaagctgcctttcaacaa
attgtgatgcctattgcttatgagtttgccccggagctcgttttggtgtcggctgggttt
gatgctgctctaggtgacccgttggggggataccacatcacacctgctgggtatggtcac
atgacccacatgctttcctcactggccaatgggagagtggtacttgccttggagggtggc
tacaatttgtcgtcgatatctaacagtatggcgacctgtacctctgtcctgctcggtgac
ccgtgtccatatctaccttacgttcaacctcaggaaagtgctgtaaagggtatcaacaat
actttggactctcacaaacagttctggaagtgtctcaaatttagagaatcaatcccagat
ctcaggtgcaaagaaggagagggggaacccgaaggaatagaagaacaaaaggaagaagag
aaattcaaaaagaacattgaggagctttcaaaaaagatgacttcagtatcagtgtatgac
agagccgctcaatcccctgaagaggccaagtcagcaaacaagtcagaacctgaagttaca
acacaggcaacatccacaaacgacaaagattctggttccgtgggagatgccacacccaca
acatcagaaaccaaaccttctgtgacagagaccacgcccacgccttctaaatcatctgat
acaatggaagatcaaggagctgtaggtggcgctgcatctatggctgtgggtggatcatct
gtaggaggggctggaactcccctcaatgaaatgatgggtgctgtgggcggggctgataat
ctgttacaagctctcactgtggcacaagcattagaagacatgggtgttgaaaggatgtat
gcagtacaacccctcacctggtgcccccatctacagacggtacagcccctgccccagggg
atcctggacacgagagccccatgtcaggactgtggcaatgagggagagaactggatatgc
ctcgtctgttacaaggttttctgtagcagatatgtcaacgaacacatggtcatacatggc
gctacagaacagcacttggtgaccttgagtttctctgacctttcggtttggtgttacgga
tgtgataactacatcgacaatcaggttgtaaatgcagctaagagagccgcgcacagacac
aagtttggaaccgagatgtctggatcgtaa

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