Mizuhopecten yessoensis (Yesso scallop): 110460754
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Entry
110460754 CDS
T05079
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04120
Ubiquitin mediated proteolysis
myi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110460754
04120 Ubiquitin mediated proteolysis
110460754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
myi04121
]
110460754
Enzymes [BR:
myi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110460754
Ubiquitin system [BR:
myi04121
]
Ubiquitin ligases (E3)
U-box type E3
110460754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
110460754
NCBI-ProteinID:
XP_021369545
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MSELTPDEIRRRRLARLGSQPNPSPQDASRSQSQGQPQGQSPGASGGSQVVSMETQPTRT
PPSSLSVDPVTPDSQRSMDIDSECSEKNSFQSQMDVDSGIENPMEVDDTEMKYDVKRKRD
TSIGSEATREQMLSTISRTFLVSWKEANSETVFIPDISCCVEENDDIDYKDLVNNVVMEV
LLKITDSKDNPVLKLRPPIESSVSPRKHGSSPKGALKLGAAPLPKREFSPKYPSEKIKEV
DMINYLLDCYERAGIEERTAPIKASIPPMSVMLSTTRSQCVCHTVLVLQGALTQPRSTGG
MSILLPYLLSHNLPRGFLSELIQTTYHDKNTFSMVFVPVIQSLIRLIHTLSLDNEDYKDP
LTVLSELCEVKSGNSRPICSLIVQQPNWIPEALSQASGMELEKLSLLGPFLGLSVFAEDN
TKVVEKYFSGHQLTPENTKLTHQSLQHGMEYVRSELFKVFHNILLNSESRDAALTFMATA
LTRNLKKSQIQVDERLVSGDGFMLNLLYILQKLAKKINLDKVDVYYLFHPNARVSIKSET
RLRSLPDDADKWVERIQSQKNPPYQEPKFPTECFYLTLHCHHLSIIPVSRRYQRRLRAIR
DLNRMVEEMEAAEPQWSILPNASRNKELLKKWRSQAQRLQKSKLCADAAVLDESLLMHCL
EFYSTHADYILKVMDPKNRGMTLPLPDDIPMQFSALPDFYLEDIADFLLFALQFVPQIFD
DPCSDRIIHVLVVLICSSTRYINNPYLTAKLVEVIFVMNPAIQQQTVNLHTRLLMHPLAL
QHLVPALMTFYTDIETTGASSEFYDKFTIRYHLSIIFKAMWSIPSHQLRMIDEARNGKHF
VKFVNMLMNDTTFLLDESLDCLKRIHEIQEDMENTVEWAKQPKEEQQSRQRQLAMDERQC
RSYLTLATETVDMFHYLTKKIKEPFLTLELADRLAAMLNFNLQQLCGSKCKNLKVKNPDK
YGWVPRKLLNTLTDIYLHLDCEAFAKAIADDERSYRKELFEDAIARMMRANIKTHNEIDS
FRSLQSKVEDLVKQKREAEIDYGEIPDEFKDPLMDTLMVDPVMLPSGAIMERGIIMRHLL
NSQTDPFNRQPLTEEQLEPATEMKEKIAKWTRQRRS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacttacaccggacgaaatcagaagaagaaggttggctagactaggtagtcag
cctaacccatcaccacaagatgcttcacggtctcagagtcaagggcaacctcaaggccag
agccctggagccagtggtggtagtcaagtggtatccatggaaactcagccaactagaact
ccaccgagcagcttgagtgttgatccagtaactccagattcacaaaggagcatggatatt
gattctgaatgttcggagaaaaacagtttccagtcacaaatggatgttgattctggcata
gaaaaccccatggaagtggatgatacagagatgaaatatgatgtgaaaaggaagagggac
accagtattggatcagaggctacaagggaacagatgctatcaactatcagtcggaccttc
ttagtttcctggaaggaagcaaactcagaaactgtgttcatccctgacattagttgttgt
gtggaggaaaatgatgacatagattacaaagatcttgtcaacaatgttgtaatggaggtc
ctattgaagataacagatagcaaagacaatccagtacttaaactccgcccacctatagaa
tcctctgtgtcaccgcgcaaacatggctctagtccaaaaggagcactgaagttgggggca
gctccactccctaaacgagaattctcccccaagtacccgtccgagaagattaaggaggtg
gacatgataaactatctccttgactgctatgagcgggctggtatagaggagaggacagcc
ccaataaaagccagtatcccaccaatgagtgtaatgttatccaccacaaggagccagtgt
gtatgtcatacggtcctggtacttcagggagcactcactcaacccagatctacaggtgga
atgtccatactactaccctaccttctttcacacaacctgccacgaggattcctgtcggag
ctgattcagacaacttaccatgacaaaaacacattcagtatggtatttgtgcctgtgata
cagagcttgatacggttgatacatacgctatctctagataatgaagattacaaagatccc
ctcacagtgctctcagagttatgtgaagtcaagagtggaaattccaggccaatttgttca
ctgattgtccaacagcccaattggattcctgaggcactatcacaagcctctggcatggag
ttggagaaactctccctgttgggaccatttttaggtctgtcggtgtttgcagaggataat
accaaggttgtagagaagtacttttcaggacatcagcttacaccagaaaacactaaacta
actcaccaatcattacaacatggcatggagtatgtacggagtgaattattcaaggtcttc
cataacatcctcctcaactcagagagtagggacgctgctctcaccttcatggccacagct
ttaacacggaatctcaaaaaatctcaaatacaggttgatgagcgacttgtatccggagat
ggatttatgttgaatctactgtatattcttcagaaattagcaaagaaaataaatttagac
aaagttgatgtatactacttatttcatcccaacgcaagagttagtataaagtcagagacc
agactacgatcacttccagatgatgcagataaatgggtggaaaggattcaatctcaaaag
aacccaccataccaagagccgaaatttcccacagaatgtttctatctgacactccactgt
caccatctgtccatcatccctgtctcccgtcgctatcagaggcggcttcgtgcaatacga
gatctcaaccgcatggtagaggagatggaggcagcagaaccacaatggtccatcctccct
aatgcctcaagaaacaaagagctcctcaagaaatggaggtcccaagcacagagactacaa
aagagcaagctttgtgctgacgcggccgtgctggatgagagtctactaatgcactgcctg
gagttctatagtactcatgcagactatatacttaaagtcatggatccgaagaatagggga
atgacattgccactacccgatgacattccgatgcagttttcagcattaccagacttttac
ctggaggacatagcagatttcctactgtttgcacttcagtttgtgccccagatttttgac
gatccatgctctgaccgcatcatacatgtattggtggtgctgatctgtagtagcacacgc
tacatcaacaatccctatctcactgccaagcttgtcgaagtcattttcgtcatgaatcct
gccatacagcaacagacagtgaaccttcacacaagactactcatgcatccacttgctctc
cagcatctagtccctgccctcatgaccttttatacagatattgagacaacaggggccagc
agtgagttttatgacaagtttacaattcgttatcacctcagcatcatcttcaaggccatg
tggagcattccaagtcatcagctaagaatgattgatgaggctaggaatggcaaacatttt
gtgaagtttgtgaacatgctgatgaatgatacaacattcctgttggacgagagtctggac
tgcttgaaaaggatccatgaaatccaggaagacatggaaaacacagtggaatgggccaaa
caaccaaaagaagaacaacagtctcgacaacgtcagctggccatggatgaacgacaatgc
cgctcctatctcacacttgctacagaaacagtagacatgttccattatcttacaaagaaa
atcaaggagccgtttctcactctggaactagctgaccggttagctgctatgttaaatttc
aacctgcaacagctgtgtggatcaaaatgtaaaaaccttaaagtgaaaaacccagataag
tatggctgggtacctaggaagctgctgaacacactgacagacatttatctccacctagac
tgtgaggccttcgccaaagctatagcagatgatgagagatcataccgtaaggagctattc
gaggatgccattgctcggatgatgcgggccaacatcaagactcacaacgagattgatagt
ttccggtcactgcagagtaaagttgaagatctagtcaagcaaaagagggaggcagaaatt
gactatggtgaaataccagatgagttcaaggatccacttatggacacactgatggtagac
cctgtgatgttgccaagcggtgccataatggagcgaggaattattatgagacatctcctc
aattctcagacagacccattcaatagacagcctcttactgaagaacagcttgagcctgcc
actgaaatgaaggaaaagattgccaaatggactcgacaaagacggtcttag
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