Mycetocola zhujimingii: C3E77_09070
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Entry
C3E77_09070 CDS
T05409
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
myl
Mycetocola zhujimingii
Pathway
myl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
myl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3E77_09070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myl03400
]
C3E77_09070
Enzymes [BR:
myl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C3E77_09070
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C3E77_09070
DNA repair and recombination proteins [BR:
myl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C3E77_09070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
DZR_2
zf-TFIIB
NFACT_N
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AWB86755
LinkDB
All DBs
Position
complement(1905568..1906464)
Genome browser
AA seq
298 aa
AA seq
DB search
MPELPEVEVVRAGLEPAVTRALITSVDVLDARSLKRHPAASGVFVDLLEGRRILAATRRG
KFLWFPLDDDTALVTHLGMSGQMLLRSPGTDDRLTRIRIGIESPDHGELLVNFVDQRIFG
GMAVDTLLPTPDGRPGGFSGAAQGPARVPSQVAHIARDPLDEAFDDAGFLERLGRKGTGV
KRALLDQTLISGIGNIYADEALWAAKIHYEQPASSLSKRRAGLLLAEVRAVLEKALAEGG
TSFDAQYVNVNGASGYFAHSLNAYGRQGQPCPRCGTPLRREKFMNRSSHFCPRCQRRR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcctgaggtcgaggtggtgcgagccggcctcgagcccgccgtcacccgt
gcgctgatcacgagcgtcgacgttctcgacgcgaggagcctcaaacgccacccggcggca
tccggggtcttcgtcgacctgctcgagggacggcggatcctcgccgcgacgcgtcgtggc
aagttcctgtggtttccgctcgatgacgacaccgcgctcgtcacccatctcggcatgagc
gggcagatgctgctgcgttcgccggggaccgacgaccggctgacacgtattcgcatcggc
atcgagtcgccagaccacggtgaactcctcgtcaatttcgtcgaccagcgcatcttcggc
gggatggctgtcgacaccctgctgcctacgccggacggtcgtcccggtggtttctccggt
gctgcccaagggccggcgcgcgtaccaagccaggtggcccatatcgcacgggatccgctc
gatgaggccttcgacgacgcggggttcctggaacgccttggccgcaagggcacaggggtc
aagcgcgcgcttctcgaccagaccctgatctctggcatcggcaacatctacgccgacgag
gcgctgtgggctgcgaagatccactacgagcagccggcgtcttccctgtcgaagcggaga
gccgggctcctgctcgctgaggttcgcgccgtgctcgagaaggcactggccgagggcggg
accagcttcgacgcgcaatacgtcaacgtgaacggggcgagcgggtacttcgcccacagc
ctcaatgcctacgggcgacagggccagccgtgtccccgctgtggaacaccactgcggcgg
gagaagttcatgaaccggtcatcgcacttctgtccgcgctgccagcgacggcgctga
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