KEGG   Myxococcus hansupus: A176_000816Help
Entry
A176_000816       CDS       T04077                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mym  Myxococcus hansupus
Pathway
mym03030  DNA replication
mym03410  Base excision repair
mym03420  Nucleotide excision repair
mym03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mym00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    A176_000816
   03410 Base excision repair
    A176_000816
   03420 Nucleotide excision repair
    A176_000816
   03430 Mismatch repair
    A176_000816
Enzymes [BR:mym01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A176_000816
    6.5.1.6  DNA ligase (ATP or NAD+)
     A176_000816
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     A176_000816
DNA replication proteins [BR:mym03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    A176_000816
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     A176_000816
DNA repair and recombination proteins [BR:mym03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A176_000816
   NER (nucleotide excision repair)
    Other NER factors
     A176_000816
   MMR (mismatch exicision repair)
    Other MMR factors
     A176_000816
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: AKQ63904
UniProt: A0A0H4WMB5
LinkDB All DBs
Position
complement(945436..947031)
Genome map
AA seq 531 aa AA seqDB search
MRRLADLYETLDQTTSTNAKVEALARYFQAAPPEDAAWALYFLTGQKLKRLIPTKLLTGW
TQELTDIPGWLFEEVYASVGDLAEVIALLLDARERPPRTEELPLSVWLEQRLLPLRQMDA
AGQREQVVSWWHTMPRRELFLLNKMLTGELRVGVSSTLVVRALAQVTGLPAPSVAHRLMG
TWTPSADFFRRLVSQDVSDGDSSRPYPFYLASPLEQAPTDLGARADWQVEWKWDGIRGQL
IHRQGSVHLWSRGEELITERFPEIVDAASVLPEGTVLDGEVLAYEDGKPLPFAKLQRRIG
RQKLTTKVLAEAPAAFMAYDLLELGGEDVRGLPLRERRAKLEALLKDSPQLPVSPIVGAQ
TWESLATARDGARERNVEGFMLKRLDSPYLTGRKRGDWWKWKIDPFTVDAVLLYAHPGHG
RRSSLYTDYTFAVWNGTELQPVTKAYSGLTDAEIGRLDRWIRAHTREKYGPVRSVDPEQV
FELHFEGIQSSPRHKCGVALRFPRIARWRTDKKPQDADTLDSLKELLHASG
NT seq 1596 nt NT seq  +upstreamnt  +downstreamnt
gtgcggcgactggccgacctctacgaaacgctggaccagaccacgtccaccaacgccaag
gtggaggcgctcgcgcggtacttccaggcggcgccgcccgaggacgcggcgtgggcgctc
tacttcctcacgggccagaagctgaagcggctcatccccaccaagctgctgacgggttgg
acgcaggagctgacggacatcccgggctggctcttcgaggaggtctacgcctccgtgggc
gacctcgcggaggtgattgccctgctgctggacgcccgggagcgaccgccgcgcaccgag
gagctgcccctgtccgtctggctcgagcaacgcctgctgccgctgcggcagatggacgcc
gcgggccaacgtgagcaggtggtgtcctggtggcacaccatgccccggcgcgagctgttc
ctgttgaacaagatgctcaccggcgagctgcgcgtgggcgtgtcctccacgctggtggtc
cgcgcgctggcccaggtgacggggctgcccgcgcccagcgtggcgcaccggctgatggga
acgtggacgccctccgccgacttcttccggcggctcgtgtcccaggacgtgtcggacgga
gacagctcgaggccctatcccttctacctcgcgtcgccgctggaacaggcgccgacggac
cttggcgcgcgagcggactggcaggtcgagtggaagtgggacggcatccgcggccagctc
atccaccgccaggggagcgtgcacctgtggagccggggcgaggagctcatcaccgagcgc
ttccccgaaatcgtggacgcggccagcgtcctgcccgagggcaccgtgctggatggcgag
gtgctcgcgtacgaagacggcaagcccctgcccttcgcgaagctgcaacgtcgcattggc
cggcagaagctgacgaccaaggtgctggccgaggcgcccgcggccttcatggcctacgac
ctgctggagctgggaggcgaggacgtgcgcgggctgccgctgcgcgagcgccgcgcgaag
ctggaggccttgctgaaggactcgccccaacttccggtgtcccccatcgtgggcgcacag
acgtgggagtccctggccacggcgcgcgacggagcccgtgagcgcaacgtcgagggcttc
atgctcaagcgcctggactcgccgtacctcaccggccgcaaacgcggcgactggtggaag
tggaagattgacccgttcaccgtggacgcggtgctgctgtacgcgcacccgggccatggc
cgccgctcgtcgctctacacggactacaccttcgccgtgtggaacgggacggagctccaa
ccggtgacgaaggcctactccggcctgacggacgcggagattggccggctggaccggtgg
attcgcgcgcacacgcgggagaagtacggcccggtgcgctcggtggaccccgaacaggtg
ttcgagctgcacttcgagggcatccagtcctcgcctcgccacaagtgcggcgtcgcgctg
cgctttccccgcatcgcccgctggcgcacggacaagaagccccaggacgccgacacgctg
gactcgctgaaggagctgctccatgccagcgggtag

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