KEGG   Mycobacterium sp. VKM Ac-1817D: G155_06665Help
Entry
G155_06665        CDS       T03634                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
myv  Mycobacterium sp. VKM Ac-1817D
Pathway
myv03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:myv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    G155_06665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:myv03400]
    G155_06665
Enzymes [BR:myv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     G155_06665
DNA repair and recombination proteins [BR:myv03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     G155_06665
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase Thr_synth_N DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: AIY45298
UniProt: A0A0A1FKS4
LinkDB All DBs
Position
1426736..1429012
Genome map
AA seq 758 aa AA seqDB search
MERYERVRLTNPDKVLYPASSTTKAEVFDYYLSIAEVMLPHIAGRPVTRKRWPNGVAEAS
FFEKQLASSAPDWLERGTIVHKSGTTTYPIVNTREGLAWIAQQASLEVHVPQWRFSSDGS
QGPATRIVFDLDPGEGVTMPQLCQVAQAVRELMSDIGLMTYPLTSGSKGLHLYVPLADPI
SSRGASVLAKRVAVQLEQAMPKLVTATMTRSLRAQKVFLDWSQNNAAKTTIAPYSLRGRD
YPTVAAPRTWDEIGDPDLRHLRFDEVLQRISDDGDLLAGLDDDAPVADKLTTYRSMRDAT
KTPEPVPRDIPVTGNNDRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPDTTAVNHLA
VHTEDHPIEYLTFHGAIPKGEYGAGNMVIWDTGTYEAEKFRVPADPDDSDAPKGEVIFTL
NGNRIDGRYALIQTEGKNWLAHRMKDQSSAAPEPKDFAPMLATEGSVDKLKATQWAFEGK
WDGYRLLVEAEHGRLQLRSRRGRDVTAEYPQFEALAADLADHHVVLDGEAVALDDHGMPS
FREMQNRARSTRVEFWAFDILWLDGRSLLRAKYTDRRKLLEALAAGGGLIVPEQLAGDGP
EAMEHAREHKFEGVVAKKRDSTYQPGRRSASWIKDKIWNTQEVVIGGWRQGEGGRSSGIG
ALVLGVPGPHGLQFAGRVGTGFTEKELTKLKGMLKPLHTKESPFDKPLPKLDAKGVTFVR
PELVGEVRYSERTTDHRLRQPSWRGLRPDKAPDEVVWE
NT seq 2277 nt NT seq  +upstreamnt  +downstreamnt
atggagcggtatgaacgggttcggctgacgaaccccgacaaggtgctctaccccgcatcg
agcaccaccaaggccgaggtgttcgactactacctcagcatcgccgaggtgatgctgcct
cacatcgcgggccgcccggtgacccgaaagcgctggccgaacggggttgcggaggcgtcg
ttcttcgaaaagcagctggcgtcgtcggccccggactggcttgagcgcggcactatcgtg
cacaagtccggcaccaccacgtacccgatcgtcaacacccgcgagggcctggcctggatc
gcgcagcaggcctcgctggaagtgcatgtgccgcaatggcgattctcatctgacggcagt
caaggcccggccacccgcatcgtgttcgacctcgatccgggcgaaggcgtcaccatgccc
cagctgtgccaggtcgcccaggctgtgcgtgaactgatgagcgatatcggcctgatgacc
tacccgctcaccagcggcagcaaggggctgcacctgtatgttccactggccgatccgatc
agctcccgcggcgcctcggtgctggccaagcgggtcgccgtgcaactcgaacaggcgatg
cccaaactcgtcaccgccaccatgactcgcagcctgcgcgcgcagaaggtgttcctggac
tggagtcagaacaacgcggccaagaccaccatcgccccgtactcgctacgtggccgcgac
tacccgaccgtcgccgcaccccgcacctgggatgagatcggagacccggatctgcgccat
ctgcgtttcgacgaagtgttgcagcggatttccgacgacggcgacctgctggccggcctg
gacgatgatgcaccggtagccgacaagctcaccacctaccggagcatgcgcgatgccacc
aagacccccgaacccgtgccccgtgacatcccggtgacggggaacaacgaccggttcgtc
atccaggagcaccatgcgcgacgcctgcactacgacctgcggctggaacgcgatggcgta
ctggtgagttgggctgttcccaagaacctgcccgataccacggcagtgaatcaccttgcc
gtgcacaccgaagaccacccgatcgagtacctgacattccacggcgccatcccgaaggga
gagtacggcgccgggaacatggtcatctgggacaccggcacctacgaagcggagaagttc
cgtgtcccagccgatcccgacgattccgatgcgcccaagggcgaagtcatcttcaccctc
aacggcaaccgcatagacggccgctatgcactgatccagaccgagggcaagaactggttg
gcgcaccggatgaaggaccagtcctcggccgcacccgagcccaaggatttcgcgcccatg
ctcgccaccgagggatcggtggacaagctcaaggccacgcaatgggcgttcgagggcaaa
tgggacggttaccgactgctggtcgaggccgagcacggacggctgcaactgcgttcgcgc
cgcgggcgcgatgtgaccgccgaatacccccaattcgaagcgctggccgccgatctcgcc
gaccaccacgtggtgctcgacggcgaggcggtggcactcgatgaccatgggatgccgagt
ttccgcgagatgcagaatcgggcccgctccacgcgggtcgagttctgggcgttcgacatc
ctgtggctcgacggccggtcattgttgcgtgccaagtacaccgatcggcgaaagttgttg
gaggcgttggccgccggtggcggcctgatcgtgcccgagcagttggccggtgacggcccc
gaggccatggagcatgcccgcgagcacaagttcgagggcgtcgtcgcgaaaaaacgggac
tcgacgtatcaacccggccggcggtcagcgtcctggatcaaggacaagatctggaacacc
caggaagtggtgatcggcggctggcgccagggagaaggtgggcgcagcagcggcatcggt
gcactggtgttgggggttccgggcccccacgggctgcagttcgccgggcgggtcggcacc
gggttcaccgagaaagagctgaccaagctcaagggcatgctgaagcccctgcataccaag
gaatcgcccttcgacaagccattgccgaagctcgacgccaaaggggtcacgttcgtccgg
cccgagctggtgggagaggttcgctacagcgaacgcaccaccgaccatcgactgcgccag
cccagctggcgcggcctgcggccggacaaagcgcccgacgaggtggtgtgggagtga

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