Mycobacterium sp. VKM Ac-1817D: G155_06980
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Entry
G155_06980 CDS
T03634
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
myv
Mycobacterium sp. VKM Ac-1817D
Pathway
myv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
myv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G155_06980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myv03021
]
G155_06980
03400 DNA repair and recombination proteins [BR:
myv03400
]
G155_06980
Enzymes [BR:
myv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G155_06980
Transcription machinery [BR:
myv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G155_06980
DNA repair and recombination proteins [BR:
myv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G155_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AIY45351
LinkDB
All DBs
Position
1484630..1488583
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKSEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDDEMRHNELSTLEAEMAVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELQDRYGEYFTGAMGAESIKKLIENFDIEAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTTLVEGDKGEYV
PAGKDSPEQGVYSSPAEAIMALDRGALSVRAKIKVRLTDARPPANIEAELFENGWKPGDA
WTAETTLGRVLFNELLPKGYPFVNEQMHKKVQARIINDLAERFPMIVVAQTVDKLKDAGF
HWATRSGVTVSMADVLVPPQKQEILERHEAEAEAIERKYQRGALNHNERNESLVKIWQDA
TEEVGKALEEYYPADNPIITIVKSGATGNLTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCETERGIIVTL
AERGPDGSLIRDAHVETSAFARTLATDAVDDKGNVVIERGHDLGDPAIDALLAAGVSQVK
VRSVLTCASAAGVCAKCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVT
GGADIVGGLPRVQELFEARIPRNKAPIADVAGRVRLEESDKFFKITIVPDDGGEEVVYDK
LSKRQRLRVITHEDGSEGVLSDGDHVEVGDQLMEGSADPHEVLRVQGPREVQIHLVKEVQ
EVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFETENRRVVAEGGE
PAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIP
AGTGIARYRDIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggcctcgccaccgcggacgacatc
cgtaactggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
tctgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcattatctgtgagcgctgtggcgtc
gaggtcactcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgcaccc
gtcacgcacatctggtatttcaagggtgtgccgtcgcggttgggctacctgctcgacctg
gctccgaaggatctggaaaagatcatctacttcgcggcctacgtgatcacctcggtcgac
gacgagatgcgccacaacgagctgtccacgctcgaggccgagatggccgtcgagcgcaag
gccgtcgaggatcagcgcgacgccgacctggaagcccgggcccagaagctcgaggccgac
ctggccgagctcgaagccgaaggtgccaagtccgacgtgcgccgcaaggtgcgcgacggt
ggcgagcgtgagatgcgtcagctccgcgaccgcgcccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtcgacgaggtgctg
taccgcgagctgcaggaccgctacggcgagtacttcaccggtgccatgggcgcggagtcg
atcaagaagctcatcgagaacttcgacatcgaggccgaggccgagagcctgcgcgagacc
atccgcagcggcaaggggcagaagaagctgcgcgccctcaagcgcctcaaggtcgtcgcg
gccttccagcagtcgggcaactccccgctgggcatggtgctcgacgccgtcccggtgatc
ccgccggagctgcgtccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggctcaagcgactgatcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtcggtggacgcg
cttttcgacaacggccgtcgcggccgtccggtcaccgggccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccgcttccgtcagaacctgctgggtaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgtcagcgt
ccccaggtgtgggacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcacctacgctgcaccgcctgggtatccaggccttcgagccgcagctggtggaaggcaag
gccatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggcagaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggcaagccgctggccatgccgcgtctggac
atggtgaccggtctgtacttcctgaccaccctcgtcgagggtgacaagggtgagtacgtg
ccggccggcaaggattcgccggagcagggtgtgtacagcagcccggccgaggccatcatg
gctctggaccgcggtgccctctcggtgcgcgccaagatcaaggtgcggctgaccgatgcg
cgtccgccggccaacatcgaggccgagctgttcgagaacggctggaagccgggcgatgcc
tggaccgcggagaccacgctgggccgggtgctcttcaacgagctgctgcccaagggctac
ccgttcgtcaacgagcagatgcacaagaaggtccaggccaggatcatcaacgatctggcc
gagcgcttcccgatgatcgtggtggcgcagaccgtcgacaagctcaaggacgccggtttc
cactgggccacccgttcgggtgtcacggtttcgatggccgacgttctggtgccgccgcag
aagcaggagatcctggagcggcacgaggccgaggccgaggcgatcgagcgcaagtaccaa
cgcggcgcgctgaaccacaacgagcgcaacgagtccctggtcaagatctggcaggacgcc
accgaagaggtgggtaaggcattggaggagtactacccggctgacaacccgatcatcacg
atcgtgaagtccggcgccacgggtaacctcacccagacgcgcaccctggcaggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcgcccgatcaagtcctcgttccgt
gagggcctgacggtgttggagtacttcatcaacacccacggtgctcgtaagggtctggcc
gacaccgctctgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtgtcg
caggacgtcatcgttcgcgagaccgactgtgagaccgagcgcggcatcatcgtcacgctg
gccgagcgcggcccggatggttcgctgatccgcgatgcgcacgtcgagacctcggcgttc
gctcgcacactggccaccgacgctgtcgacgacaagggcaacgttgtcatcgagcgcggc
catgacctgggcgacccggccatcgacgcgctgctggctgccggtgtctcgcaggtgaag
gtccgctccgtgctgacctgcgcctcggccgccggtgtgtgtgccaagtgctacggccgt
tcgatggccaccggcaagctggtcgacatcggcgaggccgtcggcatcgtcgccgcccag
tccatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggtgttacc
ggtggcgccgacatcgtcggtggtctgcctcgtgtccaggagctgttcgaggcccgtatt
ccgcggaacaaggcgcccatcgccgatgtcgcgggccgggtccggctggaggagagcgac
aagttcttcaagatcaccatcgttcccgacgatggcggcgaggaagttgtctacgacaag
ctctccaagcgtcagcgcctgcgcgtgatcacccacgaggacggctccgaaggcgtgctg
tccgacggtgaccacgtcgaggtcggcgaccagctgatggaaggctccgcggatccgcac
gaggtgctgcgtgtccagggcccccgcgaggtgcagatccacctcgtcaaggaggtccag
gaggtctaccgggcccagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccgg
cagatgctgcgtcgcgtcacgatcatcgattcgggtgccacggagttcctgcccggctcg
ctcaccgagcgtgccgagttcgagaccgagaaccgtcgcgtcgtggccgagggcggcgag
cccgcggccggccgcccggtgctgatgggtatcaccaaggcatcgctggccacggactcg
tggctgtcggcggcgtcgttccaggagaccactcgcgtgctgaccgatgcggcgatcaac
tgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggtaagttgatcccg
gccggtaccggcatcgcccgttaccgcgacatccaggtgcagccgaccgaagaggcccgc
gctgcggcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggccag
gccaccggtgccgcggtgccgctggacgattacggatacagcgactaccgctag
DBGET
integrated database retrieval system
