Methylorubrum zatmanii: B2G69_02540
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Entry
B2G69_02540 CDS
T04981
Name
(GenBank) hemolysin
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mza
Methylorubrum zatmanii
Pathway
mza00040
Pentose and glucuronate interconversions
mza01100
Metabolic pathways
mza02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B2G69_02540
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B2G69_02540
Enzymes [BR:
mza01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B2G69_02540
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Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Beta_helix
NosD
Internalin_N
DUF6383
Motif
Other DBs
NCBI-ProteinID:
ARO53134
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All DBs
Position
566377..567864
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AA seq
495 aa
AA seq
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MPAGQTYSTTPIRTTYDGQVIENLDLWVSDGDAIRVDHDNVVIRNVTIHHADGNGIVVED
VSGVTVQNSLIVNSDPPTGNGGETDAETTGIRVVNASGFTASHVTLQDSGTGIYLGQSPN
AKLSYIEGHNFHGPFPGGQLVQFYQSPNGSLSDFAVTNDASHSHVEDNVSIIDSQNVSIA
NGVIDGNNSPSGAGVMFEGNSQGGHVQNVDVIHMSNGGFSSYSDDVSFVDTRSFDNDAGD
QGRGASLSNGLIWNATGHNVTIEDSTYTDPGVANNIVWGTSSAGADVSAAPSATPMTPIH
NVFDGTATGSAPVADPVPTPAPTPAPTPAPAPTPAPSPAPSPTAPTATAPAGTGIDRDGT
ASSETMTGSRFADDLDGRGGNDTLNGLAGDDRLYGGAGNDRLDGGSGTDHLWGGTGADHF
VFKAGNGTDWVEDFQLSGTAQDVVEVSKAMFGSFNALLAAAHDVGSDVAITSGADTLWLA
DVHKAQLSAGDFLFV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgggccaaacctatagcaccacccccatccgcacgacgtacgacggacaggtt
atcgaaaatctggatctctgggtctccgacggcgacgccatccgcgtcgatcacgacaac
gtcgtcatccgcaacgtcaccattcaccacgccgacggcaacggtatcgtcgtcgaggac
gtcagcggcgtcaccgtccagaacagcctcatcgtcaattccgatccgcccacgggcaac
gggggcgagaccgatgcggagaccaccggcatccgggtcgtcaacgcgtccggcttcacc
gcctcgcacgtgaccctgcaggacagcggcaccggcatctatctcggccagtccccgaac
gcgaagctctcctacatcgagggccacaacttccacgggccgttccccggcggtcagctc
gttcagttctaccagtcgccgaacggcagcctctcggatttcgctgtcaccaacgatgcg
agccactcgcatgtcgaggacaacgtctcgatcatcgacagccagaacgtctcgatcgcc
aacggcgtgatcgacggcaacaactcgccgagcggtgccggcgtgatgttcgagggtaat
tcgcagggtggccacgtccagaacgtcgacgtgatccacatgagcaatggcggcttctcg
tcctactcggacgacgtgtccttcgtcgacacccgctccttcgacaacgatgccggcgac
cagggccgcggcgcgtcgctgtcgaacgggctgatctggaacgcgaccggccacaacgtc
acgatcgaggactcgacctacacggacccaggggtcgccaacaacatcgtctggggaacc
tcctcggccggcgcggacgtgtcggcagcgccctcggccacgccgatgacgccgatccac
aacgtgttcgacgggacggcgaccggcagcgctccggttgcggatccggtgccgacgcct
gccccgactcctgcaccgaccccggccccggccccgactccggcgccgtccccggcgccg
tccccgacggccccgacggccacggccccggccggcacgggcatcgaccgcgacggcacg
gcgtcctccgagacgatgaccggctcgcgcttcgccgacgacctcgacgggcggggcggc
aacgacacgctcaacgggctggccggcgacgatcgcctctacggcggggccggcaacgac
cggctcgacggcggcagcggcaccgaccacctctggggtggcaccggcgcggaccacttc
gtgttcaaggccggcaacggcaccgactgggtcgaggacttccagctcagcggcaccgcg
caggacgtcgtcgaagtgagcaaggcgatgttcggttcgttcaacgccctgctcgccgcg
gcccatgatgtcggctccgatgtcgccatcacctcgggcgccgacacgctgtggctcgcc
gacgttcacaaggcgcagctctcggccggcgacttcctcttcgtctga
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