Maylandia zebra (zebra mbuna): 101470273
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Entry
101470273 CDS
T02814
Symbol
brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X2
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03440
Homologous recombination
mze03460
Fanconi anemia pathway
mze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101470273 (brca1)
09124 Replication and repair
03440 Homologous recombination
101470273 (brca1)
03460 Fanconi anemia pathway
101470273 (brca1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mze01009
]
101470273 (brca1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101470273 (brca1)
03036 Chromosome and associated proteins [BR:
mze03036
]
101470273 (brca1)
03400 DNA repair and recombination proteins [BR:
mze03400
]
101470273 (brca1)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101470273 (brca1)
Protein phosphatases and associated proteins [BR:
mze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101470273 (brca1)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101470273 (brca1)
Multi subunit Ring-finger type E3
BRCC complex
101470273 (brca1)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101470273 (brca1)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101470273 (brca1)
BRCA1-A complex
101470273 (brca1)
BRCA1-B complex
101470273 (brca1)
BRCA1-C complex
101470273 (brca1)
BRCA complex
101470273 (brca1)
FA (Fanconi anemia) pathway
Downstream FA components
101470273 (brca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
RTT107_BRCT_5
zf-RING_5
zf-ANAPC11
zf-MIZ
zf-RING_10
zf-RING_4
PTCB-BRCT
TRAF3_RING
Sina_RING
Motif
Other DBs
NCBI-GeneID:
101470273
NCBI-ProteinID:
XP_004567535
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MKTPKVSDVKKGILALWETLQCPICLDLMTAPVSTKCDHQFCKFCMMKLLDKSKQNKANC
PVCKSTVTKRSLQESPGFQKLVAGLQDMIQAYEHDTGTNYFTGTSQQGRCAGVTGAETTK
GALTSGDECGTDIDNEQNALFGDLPESHSSTIAARNGFARLMGLEDSAPLTTENEALDSG
LGDAPLTSDKKMSSPTDNGEPVKAEMSDVVANTSKTRRNRGKRSRENASLYSSFIPDENE
DQSQRKSSRKKQKKDVVPDKILDHKRKKSLEKVAEWLMKVPAEGSLELEKPDENSDDSDS
CSSASTIDIRQCNSELNPKKEGRAKALEEQVFGAVYRRRVNRNVSPPLKVFTEPSIAEEI
LKSEDASSVREENGFASFAKINKSNVEGEQQMTEEINDGSGICKSAEQMEIGTEIDTGMH
VDEFNNFPESHQNRGRDDVSSVVPDNVEQQLGRKTRKRTCNVLQQVDSDLQEQARAKSEG
GEQKKTDKRKGRNTRSEKGKPSRVPKPLVLVGVQNGETTPVIRMRAEEVQVQIENYPSSE
DQVTPVVKSSRRSRRLQLFAEEVQEGHKQVSEKAKATEGNSSVAKQPEHANGEALDDVNK
VVKSAKKNGCVYNEDIGEIENIECAERTSNLRPTEAVKELNAASGSAQLDDAAVVGPTLE
SDNQNSIQSQASVCKTKCTETENEEDRNDSELDTEQLLKSFKATKRKSFYLGSPDVKSSR
GSDKDAIKEPEKKHEDCSGVESAEKALGDSSKSSYDFISPSNSPVQPRITVSEKRDPAAV
ETLISEQNCSGRFRSSPSSGLSPNKEAKRGAESPPLSVVPQVVDSGLRFTAVECDELKEA
SQNTESRADCEDVKGIKDDAPATLKCSSVNTAEHRGVPESSLTPDDLIASPVQTIHKAEI
NSNGSGEVSINSSINRKPRRKRKAQRLEPSSESDSSGSKEELPTLTQIFGTSARPSAQNR
SDSGEDDRCEGTADAADRLPPACPSPDCVDSSQASVDLFGTPEECDVPVNDTSVTIESSQ
FSSEVLVTQQKIEMQKELVRLEKLMALVSEVLQEKESSPSKEIPPQTHQSTRDMGPDAHR
QLPRDQDAGHAADRKAVPEAGPNLNPEPSDCKGVPEPNPSEPEGDTQMAAQKSAHKGVGV
KGTGVSKTPSSTSAAKTQKDSSSLSDGQEDKENNSPPKDACKAKLVLVSSGLGPNEQIMV
KKFAKRVGARVVSQVTPEVTHVIMRTDEQLVCERTLKYFLGIAGRKWVLSFQWISECFKQ
KKVLDESPFEVRGDVVNGPNHQGPSRARTTEDSNLLMKGFSICFQGPFTDMTADKMEWMV
ELCGAAVVRDPLLLDGKQKSRQLVIVQPKPESSSSTYNSLSKQATVVTRGWLLDTVATYT
LQNYSSYRT
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccaaaagtctcagatgtcaagaaagggattttggcgctttgggagactctg
cagtgtcccatttgcttggatttaatgactgctccggtatctactaagtgtgaccatcaa
ttctgcaaattttgcatgatgaaacttttggacaaatccaaacaaaacaaagccaactgc
cccgtgtgtaaaagcacagtcaccaaaaggagcttacaggagagccctgggtttcagaaa
cttgtcgctggtttgcaggacatgatccaagcatatgagcatgacactggcacaaactac
ttcactggaacatcccagcaagggcgatgtgcaggtgtcacaggtgcagaaactactaaa
ggagctctgacatctggagatgaatgtggcactgacattgacaatgaacaaaatgcactc
tttggtgatcttccagaatcccactcctcaactattgcagcccggaatggatttgcaaga
ctcatggggcttgaagattccgctcctttgacgacagaaaatgaagctctggatagcggg
cttggtgatgctccactaacgtctgacaagaaaatgtccagccccacagacaacggggaa
ccagtgaaagctgaaatgtcagacgttgtggcgaatacttcaaaaacgcgtaggaataga
ggcaaaaggagccgggagaatgcctccctttattcatcattcattccagatgaaaacgaa
gaccaatcccaaagaaagtcctctaggaagaagcagaaaaaagatgtggtgcccgacaag
atccttgaccataagcgtaagaaaagtttagagaaggttgcagagtggctcatgaaagtt
ccagctgaaggaagtcttgagttagaaaaaccagatgaaaactctgatgactctgacagc
tgttcctccgcttcgacaatagatatcaggcaatgcaacagtgaactgaatccgaagaaa
gaagggcgggccaaagccctcgaagagcaggtgtttggggctgtctacagacgaagagtg
aacaggaacgtctctcctccgcttaaagtttttacagagccatcgatagctgaagaaata
ttgaagagtgaagatgcttccagtgttagagaggaaaacggttttgcttcttttgcaaaa
ataaacaaaagtaacgtggagggtgagcagcaaatgacagaagaaataaatgatggcagt
ggcatttgtaaatcagcagaacagatggagatcgggacagaaattgatacaggcatgcat
gtggacgagttcaacaactttccagaaagtcaccaaaacagaggcagagatgacgtttcc
agtgttgtgcctgataatgtagaacaacaactggggaggaagacgaggaaaaggacgtgc
aatgttttgcaacaggtagacagcgacttacaagagcaagctcgggcaaaatcagagggt
ggtgagcaaaagaaaactgacaaaaggaaaggtagaaacacaagatccgaaaaaggcaag
ccctccagagtgccgaaaccccttgtcctcgttggagttcagaatggggaaaccacccct
gttattagaatgagagcagaagaagttcaggttcaaattgagaattaccctagcagcgag
gaccaagtaactcctgtcgttaagagcagtaggagaagcagaagacttcagctgtttgct
gaggaagtccaggagggtcacaagcaggtgagcgagaaagctaaggcaactgaaggaaac
agcagtgtggcaaagcagccggaacatgctaatggcgaagcgcttgatgatgtaaataag
gtggtaaagtcagctaaaaaaaatggatgtgtttataatgaagacataggagagattgaa
aacatagagtgtgctgagagaacatcgaatctgaggccaacagaagctgttaaagagtta
aatgctgcctcaggctctgctcagctagatgatgcagccgtggtagggccaacgcttgaa
agtgacaatcaaaacagtattcagtcacaggcctcggtttgtaaaactaaatgtaccgaa
acagaaaacgaggaggacaggaacgacagtgagctcgacacggagcaacttctcaagagc
ttcaaagcaactaaaaggaaatctttctatcttggaagtccagacgtgaaaagcagccgc
ggttcagacaaagacgccatcaaagaaccagagaagaaacatgaagattgttctggtgtt
gaatctgcagaaaaggctttaggagactccagcaagtcctcttatgatttcatctctcct
tccaactcaccggtccagccgagaataactgtttctgagaaacgggatccggcagcagtg
gaaaccttgatctctgaacaaaactgttcaggtcgcttcaggagtagtcctagcagtgga
ctgagtcctaacaaggaggcaaaacgtggtgcagaaagtcctcctctttctgtggtccct
caggtcgtagattctggtctccgcttcacagccgttgaatgtgacgagctaaaggaagcc
tctcaaaacacagagagtcgggctgactgtgaggatgtgaaggggataaaagatgacgca
cctgccactttaaagtgttcctcagtcaacacagctgaacataggggagttccagagtct
tctttgacccctgatgaccttatcgcgtcaccggtccaaactatccacaaagcagagatt
aacagcaacggtagtggagaggtcagcatcaactcctccatcaataggaaaccgaggagg
aagagaaaggctcagagactggagccttcatccgagtccgatagcagtggatccaaagaa
gaattacccactctgacacaaatctttggaacatcagctcgtccttccgctcagaatcgg
agcgactccggtgaagacgacagatgcgagggaacagctgatgcagcagatcggttacca
cctgcatgccccagccccgactgcgttgattccagtcaagcatctgtggacttgttcggc
acgccagaagaatgtgacgttccagtaaatgacaccagtgttaccatagaatcgtcacag
ttttcaagcgaagtccttgttacacagcaaaagatagaaatgcagaaggagctggtgagg
ctggagaagctgatggccctggtctcagaggtgcttcaggagaaagagagcagtccttcc
aaagaaatccccccacaaacccatcagagcaccagagacatgggcccagacgctcacaga
cagcttcctcgtgaccaggacgcagggcacgccgcagacaggaaagctgttccagaagcg
ggaccgaacctaaacccagaaccatctgattgcaaaggtgttcccgaacccaacccgtca
gagcctgaaggtgacacacagatggcagcgcagaagtctgcgcataaaggggtcggtgtc
aaaggcactggagtctccaaaacaccttcttcaacttcagcagctaagactcagaaggac
agcagttctctgtccgatgggcaagaagacaaagaaaataacagccctccaaaagacgca
tgcaaagctaagctggtgcttgtgtcatcaggattgggcccaaatgagcagattatggtg
aaaaagtttgccaagagagttggtgcccgtgtggtttcccaggtaacaccagaagtgact
catgtcatcatgcgtacagatgaacagctggtatgtgagcgcacactgaaatacttcctg
ggaattgcaggcaggaagtgggtgttgagtttccagtggatttctgagtgcttcaaacaa
aagaaagtcttagatgagagtccgtttgaggtgagaggggatgtggtgaatgggcccaac
caccagggcccctcaagagctcggaccactgaagacagtaatctgctcatgaagggcttc
agcatctgcttccaggggccttttacagacatgactgcagataaaatggagtggatggtg
gagctctgtggagctgctgtagtgagagatccacttctactcgatggtaaacagaagtcc
cggcagctcgtcattgtacagcctaaaccagagtcatcatcttcaacttacaacagtctt
tccaaacaagctactgttgtaacccgtggttggttgttggatacagttgcgacctacacc
cttcaaaattacagcagctacagaacataa
DBGET
integrated database retrieval system
