Maylandia zebra (zebra mbuna): 101480246
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Entry
101480246 CDS
T02814
Symbol
carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101480246 (carmil1)
Membrane trafficking [BR:
mze04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
101480246 (carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
101480246
NCBI-ProteinID:
XP_024659965
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All DBs
Position
LG11:complement(6621626..6703563)
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AA seq
1400 aa
AA seq
DB search
MSEEVSEVPKELLESVRDAVGRKVKLSLRKRVKLEIKGDKMENRVLALASYRAYLLTARI
PAKVEHSFNYLEIQGIACNKPTQLSIEYERGSFSLKLPSTDEVNEVVAHIGNCMQRICPG
LPPSKVMKKLCMEPPDRLSSLQILWENNKPAEPGPCGGFSQMYRCVCDWLGMPYREEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTKVSTKDYKLSADVCEQILR
VVSRSSRLEELVLDNAGLKTDFAQKLAAALAHNPSSGLTTINLANNPLEDRGVSSLGAQF
AKLRLGLKHLNFSKTSLSPKGVNSLCQSLSANPSIPSSLVHLDLSGNMLRGDDMQHFYHF
LGQPNSLATLDLSNTDCLLDQVCSALLRGSVEHLSVLNVSKSVFPHRKGKDVPPSFKHFF
SSAASLTSINVSGTKLPPEAVKALLLGLASNPSVKDVSLDLSCCELGHCLRSGGSQILEG
CIAEIPNISSLDISDNGLDSELSTLLVWLAKNRSIRHLSLGKNFNNIKSKNLAPVLDSLV
HLIQEEESPLNSLSLADSRLKSDLTIILNALGSNSTLTRLDISGNAMGDMGAKMLAKALQ
INSKLRTVIWDKNNTSPQGLQDVAAALEKNFTIRFMPLPIIDASQALKASPEKTEDALLK
IETYLYRNHETRKYLQEQAYRLQQGIVTTTTQQMIDRICVKVQDHLNSLRNSETDAILED
VRSAESLIKDARNSKTLLPNLYHLGSASREEVNSTSVGPIQEKLESMAGEVTAVMDQQLQ
TLLETMMDAAESLCPHVMKKSNLRVELMKASSARMVVPKSFVSKTLLEQSGVDIINKISE
VKLSLASFLSDRIVDEILEALSTSQHVLADHLVRRGRPLVQQESVDLDVPEEKIPKRASA
EILEAERLEDLETCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPIHVEDTSTS
SHTPSTPSMVLPKLEPCPTGVMVELPSEEEKKLQHFTKLRPRRNKKTHSSKVPQISSTPS
QDGEQNGLMGRVDEGVDEFFSKKVTKMDSKRSLKSSESQDGEKKKKGGFLNLIKRSSKSD
KSDKLDKSEKIQATLTSSGPSPSAQPSVIPEEPSSPKVAIKSPAPEPKSRDASSRSQPTD
YSSSSDRSEELRTPDSMDEPWEGSDGRGSPQGGKRYPGVQMMGSGLLAEMKAKHERRAYK
SSSPDRPDSNTTAKPQPTTPESRSPGGSVSKPDPASPEKTSPRGETKPEPAPRLRATSSS
SSPGGPVSPKPPVPQGAKPALAARPTIPQKPRTTNSSRSIDESSDSTSSGSVSHKATGLP
PTLKRVLSEKGKDGVSTNKTTQEVRSMLDSVQRSSPLSTNSEDHSSSKNKDQSANSDKDK
AAGKKSSDSGEEADKDFILI
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaagtgtcggaggtcccaaaagagcttctggagagcgtgagggatgcggtg
ggaagaaaagtgaagctgtcactgcggaagagagtcaaactggagatcaaaggagacaag
atggagaacagagtattggctctcgcatcttaccgagcctacctcttgacggcacgcatt
cctgccaaggtggaacactcctttaattatctggagatccagggaattgcttgcaacaag
ccaacgcagctgtccatagaatatgagcgcggctcattttcgttgaagttgccctccaca
gacgaggtgaatgaggtggtggctcacataggaaactgtatgcagaggatatgtccaggt
ctgccccctagtaaagtgatgaagaagctttgcatggagcctccagacaggctctcttct
ctgcagattctgtgggagaacaataaacctgctgaacctggaccctgtggtgggttttct
cagatgtaccgatgtgtttgtgactggttggggatgccttacagagaagaggtgcagtgg
gatgtagacactatatatttaacgcaagacaccagagaacttaatttgcaggacttcagt
catctggagaacagggatctggtagctataatagcagtcctggagtttaaccagtggttc
accaaggtctctactaaggattacaagctgtctgcagatgtgtgtgagcagatccttcgg
gtggtgtctcgatccagtcgactggaggagttggtcctggacaatgcaggactcaaaacc
gattttgcccagaagctagctgctgctctggcccacaaccccagctcaggactcaccact
attaatcttgccaacaacccactggaggacagaggtgtttcctccctgggtgctcagttt
gccaaactccgtttggggctcaagcatttaaacttttccaaaacctcactctcacccaaa
ggggtgaatagcctttgccagtcactgagtgccaacccgtccatccccagcagcctagtc
catctggacctctcagggaacatgctccgaggagacgacatgcagcacttctaccacttc
ctcggccagccaaacagcctggcaacccttgacctctccaacactgattgcttattggac
caggtttgctcagcactgctgcggggctcagttgaacacctctctgttctcaacgtgtca
aagagtgtcttccctcacaggaaaggcaaagacgtgcccccgtccttcaagcatttcttc
agtagtgccgcatctctcacctccatcaacgtgtcaggaaccaagctgccaccagaggct
gtgaaagcgctcctacttggtctggccagtaacccaagtgtgaaggatgtctctctagac
ctcagctgctgtgagcttggccattgtctgcggtctggaggatctcagatccttgaaggt
tgtattgctgagatcccaaacatctccagcctggatatctctgacaacggattagactca
gagttgtccactctgcttgtttggttggccaagaaccggtctatcagacacctctctctg
ggcaagaacttcaacaacatcaaatccaaaaatctcgctccagtgttggacagcttggtt
cacctgattcaggaggaggagtcgcccctcaactctctgtctctagcagactccaggctc
aagagtgatctcaccatcattctcaatgctttgggcagcaactccacgctcacaaggctt
gacatcagtgggaatgcaatgggtgacatgggggccaaaatgctggctaaggcgttacag
atcaactccaagctcaggactgtgatctgggataagaacaacaccagccctcagggtctg
caggatgtagcagccgctctggaaaagaacttcaccattcgtttcatgcccctccccatc
atcgatgcctcccaggctctaaaggcgagccctgagaaaactgaggatgccttactaaag
attgaaacgtatttgtacaggaaccacgaaacaagaaaatatcttcaggaacaggcttat
cggcttcagcagggcatcgtaaccacaaccacacagcagatgattgacaggatttgtgtt
aaagtccaggaccacctgaactctctgaggaactcggagacggacgccatcttggaggat
gtcaggtcagcggagagcctcatcaaagatgccagaaattcaaaaacgctgcttcccaac
ctctaccacctcggatcagcttccagagaggaggtgaacagtacttcagtaggtccaatt
caggagaaactggagtctatggccggggaggtgactgctgtcatggaccaacagctgcag
acgctattggagaccatgatggatgcagcagagtctctgtgtcctcatgtgatgaagaag
agtaatcttcgagtagagctgatgaaggccagctcagctaggatggttgtacctaaaagc
tttgttagcaaaaccctcctggagcagtctggggtagatatcatcaacaagatcagtgag
gtgaagctgagtctagcgtcctttctgtccgatcgcatcgtcgatgagattttggaggct
ctttccacgtcacagcacgtgctggcggatcatctggtacgccgaggtcgccccttggtg
cagcaggagtcggtggacctggatgtgccggaggaaaagattccaaaaagggcatcggcc
gagatactggaggctgagaggcttgaggatttggaaacatgtatgatgactccaaaatcc
aaaaggaagagcatccacagcaggatgctgcgaccagtgtctcgtgcctttgagatggag
tttgacctggacaaagccctagaagatgtccccatccatgtggaggatacttcaacttca
tctcacactccatccactccatctatggtgctgcccaaactggagccatgtcccacaggt
gtgatggtggagcttccatctgaggaagaaaaaaagctccagcacttcaccaaactccga
cctcggaggaacaaaaagacacattccagcaaagtaccacaaatcagcagcactccatct
caagatggggaacagaacggcctcatgggaagggtggatgagggtgtagatgagttcttc
tctaaaaaagtcaccaagatggattccaagcgttccctgaagagttcagaatctcaagat
ggcgagaagaaaaagaaaggaggatttctaaatctcatcaaacgatcctctaaatcggat
aaatcagacaaactggataagtctgagaaaatccaggccactttaacatcctcgggtcca
tcaccctctgcacagccatccgtcatcccagaggagccttcctcaccgaaggttgcaatt
aagagcccagcacctgagccgaagtcgagagacgcctccagtcgctcacagcccacagac
tacagcagcagctcagaccgctcagaggagctgaggacaccagactccatggacgaaccc
tgggagggttcagatggcagggggagtcctcagggaggcaagcggtatcctggtgtgcag
atgatgggcagtgggctcctagcagagatgaaagccaagcacgaaagaagagcgtacaag
tcttccagccctgacagacctgacagcaatacaacagccaagcctcaacccaccactcca
gaaagcaggtctccaggtggttctgttagtaagcccgaccctgcttctccagagaagacc
tcaccacgcggtgagactaagccagagccagctcctcgtctcagagctacatcttcctcg
agttccccaggaggaccagtaagtcccaaaccaccggtgccacagggagcaaagcctgct
ctggctgctcgacctacaatcccgcagaagccgaggaccacaaatagcagcaggagcata
gatgagagctcagattccaccagcagtggcagtgtgtctcataaagccacaggtcttcct
ccaacactgaagagggtgctatcggaaaaaggcaaggacggagtctccaccaacaaaacc
actcaggaagtgagatctatgttggactctgttcagcgatccagccctctcagcaccaac
tctgaagatcacagctcctccaagaacaaggaccaaagtgcaaactcagacaaggacaaa
gcagcaggcaagaagtcctcagactctggggaggaggcagacaaagactttattttgata
taa
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