KEGG   Maylandia zebra (zebra mbuna): 101481263Help
Entry
101481263         CDS       T02814                                 

Gene name
lig3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03410  Base excision repair
Module
mze_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101481263 (lig3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mze03400]
    101481263 (lig3)
Enzymes [BR:mze01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101481263 (lig3)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101481263 (lig3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 101481263
NCBI-ProteinID: XP_004551220
LinkDB All DBs
Position
LG10
AA seq 1012 aa AA seqDB search
MQKTLILLLQKTICVVLNPSGKLVRCQKHFRLCRAFSVYSCAERLPLSFHELHFTRKISA
LSSVSQKHSLLPNYPPWLFLHQSFSNQPDMADQRFLVEYAKRGTAGCKKCKDKIQKGIVR
IGKVVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQDADKEIIN
KHVSDLMAKVNASPKKKVQAKLNTTGQLMAPPADPSVNAPRKFSGFTATKAGSSSSSPGA
SSSPAKASQGSALSTQLCDPQHKDCLFREFRKLCAMVAENNSYNTKTQIIEKFLRKGTSG
DKFHGDLYLTVKLLLPGVVKSVYNLNDKQIVKLFSRIFRSNQDDMVRDLEQGDVSETVRM
FFDESKSFPPAAKSLLTIQEVDASLTRLSQLTKEDEQQNELEDIAKKCTSNDLKCIVRLI
KHDLKMNAGAKHVLDAVDPNAYDAFKASRNLGDVIERVLKNQQEVSNGSGPKKLLTIEAS
LMTPVQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGDNFSYFSRSLKPVLPH
KVAHFKEYIPQAFPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDAKVCLFVFD
CIYFNGVSLMERPLCERRKFLHDNMVEVPNRILFSEMKHVTRAGDLADMITRVIREGLEG
LVLKDVKSTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCY
DPDAKKWCTVTKCSGGYDDAMLARLQKELDVIKISKEPSKIPSWLKIIKNYYPDFIIRDP
EKAPVWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKSATNLHQLKELYRISKENC
DFKVTAGPSTSNDDKGSSGGDSGGSSPSSSSNKGAPPKKTSSSTPPKAKAVKSQPRTPSS
DAPSAKKVKKSESVHSNGQTKAKATSQKLEPRNDKTLLDIFSGVKLFLPDSVQDFNKLRR
YFVAYDGDLVPDYDAASATHTLAEPEEQSQAQKVTPSWIWECIRKRRVVAPC
NT seq 3039 nt NT seq  +upstreamnt  +downstreamnt
atgcagaaaactctcattttattgcttcaaaagactatctgcgtagtcctaaatcccagt
ggaaaacttgttagatgtcagaaacacttcaggttgtgtagggccttttctgtctattca
tgtgctgagcgtctacctttgtcttttcatgagttacattttacaaggaaaatctctgca
ttatcctcggtatcccaaaagcacagtcttctcccaaactatcctccctggcttttcctg
catcaaagtttctccaatcagccggatatggcagatcagaggtttctcgttgaatatgcc
aaacgtggcacagcaggatgtaagaaatgcaaggacaaaatccagaagggaatagtgcgc
ataggcaaagttgtgccaaaccctttcagtgagtctgcaggggagatgaaagagtggtac
catgtgaagtgtatattcgaaaagctggaaagagccagagccaccacgaagaagatcgag
gatatcaccgacctggagggctgggaggaattacaggatgctgacaaggagatcataaat
aaacacgtttcagacttgatggccaaagttaatgcaagtccaaaaaagaaggtgcaggcc
aagttgaacaccaccggtcagctgatggctccccccgctgacccatctgtcaatgcgcca
aggaagttttcaggcttcactgcaacaaaggctggcagttctagcagcagccctggggcg
tcctcttcccctgccaaagccagccaaggcagcgcgctgtccacccagctctgtgacccc
cagcacaaagactgcctcttcagagagtttcgcaagctctgtgccatggtggccgaaaac
aacagctacaatacaaagacgcagattattgaaaagttcctcaggaagggcacaagtgga
gataagttccacggcgatctttacctgactgtgaaattgctcctgccgggtgttgtgaaa
agcgtctacaacctcaatgacaagcagattgtaaaactcttcagccgcatattcaggagc
aaccaggatgacatggtgcgcgatctggagcagggtgacgtgtctgagacggtgaggatg
ttctttgatgagagtaaatcatttcccccagctgccaaaagtctccttaccatccaggaa
gtggacgcatccctgacccgactttcccagctgacgaaggaggatgagcagcagaacgag
ctggaggatattgccaaaaaatgcaccagtaatgacctgaaatgcatcgttcgcctaatt
aagcacgatttgaagatgaacgctggtgctaaacacgtcttggatgcagtggatccaaac
gcttacgatgccttcaaggcctcgcgtaatctgggagacgtgattgaaagggtgttaaag
aatcagcaggaggtgtccaatggttcaggacctaagaaactcctcactatcgaggcctca
cttatgacccccgtccagcccatgttggcggaggcgtgtaaatccatcgagtacgccatg
aagaaatgccccaacgggatgtactctgagatcaagtacgatggcgagcgcgtgcaggtc
cacaagaacggagacaacttcagctacttcagtcgcagcctcaaaccagtgctgcctcac
aaagtggcccatttcaaagaatacatccctcaggcttttcctggtggccacagcatgata
ctggatgctgaagtcctcctaattgacacaaagaccagtaaacccctgcccttcgggacc
ttgggtgtacacaagaaagcagcctttcaagacgccaaggtgtgcctttttgtttttgac
tgtatctacttcaatggtgtgagtctcatggagaggcctctgtgtgaacgcaggaagttc
ctgcatgacaacatggttgaagtccccaacaggatcctgttctcagagatgaagcacgtc
actagagcaggggatctggcggatatgataactcgtgtcatcagggagggacttgaaggt
ctggtgctaaaagacgtaaagagcacctatgagccggggaagcgccactggctgaaagta
aagaaggactatttgaatgaaggggcaatggcagacacagctgacctggtggtgctggga
gccttctacgggaaaggctcaaatgggggcatcatgtccagttttctaatgggctgttac
gacccagacgccaagaaatggtgcacagtcaccaagtgctccggaggctacgacgacgcc
atgttggccaggctccagaaagagctggatgtgatcaaaatcagcaaggagccaagcaaa
atccctagctggttgaaaatcatcaagaactattatcctgatttcattatccgcgatcct
gagaaagcacctgtgtgggagatcacaggcgcagagttttccaaatcggaaatgcacacc
gctgatggcatctccatccgcttcccccgcatgacgagaatccgcgatgacaaggactgg
aagagcgccaccaacttgcaccagcttaaagagctgtaccgcatatcgaaggagaactgc
gacttcaaagtgacagcaggtccgtctacatccaacgatgacaagggctcatcggggggg
gacagcggaggaagctcgccatcgtcctcctccaacaaaggcgctccgcccaagaagacg
agcagcagcactccacccaaagccaaggcagtgaaatcccagcctcgcactcccagctca
gacgcacccagtgctaagaaggtgaagaagagtgagagtgtccacagcaacggacaaact
aaagcaaaagctacctcacagaaactggagccaaggaatgacaagacactgctggacatc
ttcagcggcgtgaagcttttcctgcccgactcggtgcaggactttaacaagctgaggcga
tacttcgtggcgtacgacggggacctcgtgccagattacgacgcagcctccgccacgcac
actctggccgaacccgaagaacagagccaggctcagaaagtgacccccagctggatctgg
gaatgtatccgcaagaggcgtgtcgtagctccctgttaa

DBGET integrated database retrieval system