Maylandia zebra (zebra mbuna): 112429835
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Entry
112429835 CDS
T02814
Name
(RefSeq) collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04510
Focal adhesion
mze04512
ECM-receptor interaction
mze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112429835
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112429835
09142 Cell motility
04820 Cytoskeleton in muscle cells
112429835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mze04147
]
112429835
00536 Glycosaminoglycan binding proteins [BR:
mze00536
]
112429835
Exosome [BR:
mze04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112429835
Glycosaminoglycan binding proteins [BR:
mze00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112429835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112429835
NCBI-ProteinID:
XP_024654896
LinkDB
All DBs
Position
LG3:complement(12800376..12836051)
Genome browser
AA seq
1495 aa
AA seq
DB search
MWAESGPWLQFETPSSHIARRSGLDLCDVGLPGPRGSPGDTPLSGPKTLTIYKGDKGDPG
PKGTKGYPGIPGLPGPFDYPGEYGEKGIPGYPGSRGAPGFNGPPGVPGLQGPKGRPGTPG
SSGYPGFKGDQGDPGPPGPSSFVNGGYAIQGPPGDSGLRGFPGPRGDQGPQGFPGPPGQP
GPDRFGPGLRGPPGPKGVKGEVGDPGLRPTGFEGFPGLPGPPGPSGLPGPQGPPGTNAEP
CYIYPDTGDSEGLPTAPPGGPGPPGPTGFPGNIGAKGFRGDPGDCRCSGGDFSGLDGPPG
RPGTNGSPGLPGVKGFLGDPGSLGFSGRPGPSGPPGQRGFPGRKGEKGAPYYPTLNLGLK
GVIGDPGPRGPTGETGNPGRDGLPGFPGFPGPPGDAGIGSRGEKGFQGFPGSKGRPGGPG
EPGIGYDGAPGLRGDPGEPGIPGSPGIPGSPGEKGQTLACVFTGEAGDPGDSGFLGQPGL
KGKPGLQGPSGRPGFDGPKGERGDPGTGGVRGPEGFTGPRGDPGIPGIPGQSFDGPRGKD
GLPGRPGAKGQPGEVLGATPGFPGQNGLPGIPGDKGQPGTPGGPGMPGFDGRPGAPGRKG
ERGVNGFPGNPGLPGLPGDPDGRIPGPPGPDGSKGLRGPPGCPGFPGRKGERGEPGFPGP
AGMKGTPGRPGATGLPGTRGRPGLPGPGTIDGIPGTPGRKGDRGIQGMMGFPGFAGPPGS
SGFPGVKGQPGVPGANGRPGSPGFFGTKGDRGLPGPPGFPGRPFSAELVEKGDIGDPGIT
GLSGFTGPRGDKGQPGAPGRPGRPGAPGFPDLSKGLPGEPGLSGETGLPGFSGQKGESGI
MGFPGTVGPKGNNGFPGLSGRPGEVGRPGAKGLPGETFGYPGAPGLKGRQGDSGIPGDQG
KVGEPGDNGFSGNPGFLGQKGIPGEQGRYGIMGSPGFPGPKGQPGLPGIGRGPDGLPGRP
GFLGNRGFKGFPGPPGLDGLNGLAGPKGLPGNPGAILGGSPGLSGSPGLKGERGVSQPGV
PGYPGQKGQRGEPGPFGLKGSPGIPGPPGPRSIESFPGPTGDAGLPGLDGQYGVQGPPGL
PGPPGPGTAQGDRGDPGLPGFPGNPGTKGEPGLPGGPAFPGRPGLKGQKGDGGFAGIPGV
QGFRGDSGFPGSKGMAGIRGFPGPKGLPGVIFPASLPNGPYPQGDPGFPGERGSPGNPGE
PGQSGFPGRKGTVGNPGPSGRLGRTGVPGFQGPLGDPGPPGFPGSPGAQGFPGTIGPRGI
PGSVGRSHSIGYTLVKHSQSTQVPMCPQGMAKLWEGYSLLYVEGQEKAHNQDLGQPGSCL
PRFNTIPFLYCSPSEICYYASRNDKSYWLSTTASIPMMPVEKEEIRPYISRCSVCEAPSQ
AVAVHSQDMTIPNCPIGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIEC
NGARGTCHYFANKYSFWLTTVDPENEFTFSPAKETLKGGQERSRVSRCQVCSKIL
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgagagtgggccttggctgcaatttgagaccccttcttcccacatagccagg
aggtctggcctggatctgtgtgacgtgggtcttcccggacccaggggtagtcccggcgac
acgccgctaagcggcccaaaaacactcactatctacaaaggagataagggtgaccccggt
ccaaagggaactaaaggataccctggaatacccggcctacctggaccctttgactatcct
ggagaatatggagaaaagggcattcctggataccccgggagcagaggggctccagggttt
aacggaccgcccggtgttccaggactgcagggacccaaaggacgtccaggcaccccaggc
tcatcgggctacccaggattcaagggagaccagggagaccccggacccccaggacctagc
tcttttgttaatgggggttatgctattcaaggacctccgggggactcgggtttacgtggc
tttccaggaccccggggtgaccagggacctcaaggctttccaggacctcccggccaacca
ggacctgatcgttttggtccaggtcttcgaggtcctcctgggcccaaaggtgtaaaagga
gaagtgggtgaccccggcttacggcccactggttttgaaggtttcccaggactccctggg
cccccaggtcccagtggccttcctggacctcaaggccctccaggcacaaacgctgagccc
tgctacatctatcctgatacaggtgactctgaaggtctaccaactgctccccctggaggc
cctgggccgcctggtcccacaggatttcctggaaacattggtgccaaagggtttagaggc
gaccctggtgactgcagatgttctggaggagacttctcggggttagatggaccacctgga
cgtccaggaaccaatggcagtcctggcctgcctggggtgaagggttttcttggagacccc
ggttcactaggcttcagtggtcgtccaggacctagtggtcctcctggtcagcggggcttc
cccgggcgtaagggagagaagggggctccatattaccccaccctaaatctggggttgaag
ggagtcataggagatcctggacccagaggacctacaggtgaaacaggaaatcctggaaga
gacgggctgcctggcttccctggatttcccggacccccaggtgatgcaggcatcggctca
aggggagaaaaaggatttcaagggtttccaggttctaagggacgtcctggaggccctggt
gagccgggcattggctatgatggagcacccggcttgcgtggagaccctggagaacccggt
atacctggttctccaggtataccgggttcacctggagagaaaggacaaactctggcttgc
gtatttacgggtgaggcaggagacccaggcgattccggtttccttggacaaccaggtctt
aaaggtaaaccagggctgcaagggccctctggacgtccagggtttgatggccccaaagga
gaaagaggagaccccggcaccggaggcgtgcgtggacctgaaggtttcactggacccaga
ggggaccctggtattccaggtatcccagggcagagttttgatgggcccaggggtaaggac
ggtctcccaggccgtcctggagccaagggccagcctggagaggtgctaggagctacacct
ggatttcctggtcagaacggtttaccaggaattcctggagacaagggccagccgggaaca
cctggaggacctggaatgcctgggtttgatggacgtcctggtgctcctggtcggaaagga
gaacgcggagttaacggttttcctggtaatcctggccttcctgggcttccaggtgaccca
gatggtcgcattcctggtccacctggccctgatggtagtaagggtctgagaggaccacca
ggctgcccaggtttccctggtcggaaaggagaaagaggagaaccaggtttcccaggacct
gctgggatgaaaggaactcccggacgacctggtgctactgggttaccaggaacaagggga
cgccccggtttaccaggaccagggactatagatggaattccaggaacgccaggaagaaag
ggtgacagaggcatccaaggaatgatgggcttccctggatttgcaggacctcctggcagt
tcaggatttcccggagtgaaaggacagcctggagtgcctggagcaaatggacgccctggg
tcgcctggattctttggaactaaaggtgacagaggattacctggtccacccggatttcct
ggtagacctttttcagctgagcttgtagagaaaggagacatcggagaccctggaataacc
ggcctttctggctttactggacccagaggtgacaagggtcagccaggtgcacctggtcgt
ccaggacgacctggagctcctggtttccctgatctgagtaaagggctgccgggagaacct
ggcctttctggggaaacaggacttccaggcttctctggacaaaaaggagaatctggaatt
atgggattccctggcactgtgggaccaaaaggcaataatggctttccaggtttatctgga
aggcctggagaagttggtcggcctggtgccaaaggactacctggagaaacttttggttat
cctggagcaccaggacttaaaggccgacaaggagattcagggatcccaggcgaccaaggg
aaagttggtgaacctggcgataatggattttcaggaaatccaggtttcctcggacagaag
gggattcctggtgaacagggacggtatggaataatgggctctcctggtttccctggacca
aaaggtcagcctggattgccaggaataggaagggggcctgatgggcttcctggtcggcct
ggattccttggaaatcgtgggtttaaaggttttcccggaccacctggtttggatggcctt
aatggcctagcaggacctaaaggcctgcctggaaacccaggtgcaattctgggaggtagc
cctggcctttctggtagtccagggttgaagggagaaagaggtgtttcccaacccggtgtt
ccagggtatcccggccaaaaaggacaaagaggagaaccaggtccttttggattgaaaggg
agcccgggtatccctggacctcctggacccagatcaatagaaagctttcctggacctaca
ggagatgcaggtctccctggactggatggacagtatggtgtccaaggtcctccaggtctt
cccggcccacctggtccaggcacagctcagggagacagaggtgaccctggtctgccaggc
ttcccagggaaccctggtacaaagggtgaaccaggattacctggaggtcctgcattccct
ggcagacctggtttaaaaggacaaaagggtgatggtggttttgctggaattcctggtgtc
cagggttttagaggtgactctggttttcctggaagcaaaggaatggcaggaattagaggg
tttccaggtccaaaaggtttgcctggagtcatatttccagcttcactgccaaatgggcca
tatccacaaggtgatccaggtttccctggtgaaagaggaagccctggtaaccctggagag
cctggtcagtctggttttcctgggcgtaaaggtactgtggggaaccctggtccatcgggt
agactgggcaggactggagttcctggttttcaaggacctcttggggatcccggacctcct
ggtttccctggatccccaggagcacaagggtttcctggtacaattggccctcgcggcatt
cccggcagcgtcggccgcagccacagcatcggctacactctggttaagcacagccagagc
acccaggttcccatgtgtcctcaaggcatggccaaactgtgggagggctacagtctgctg
tatgtagagggacaggagaaggcacacaaccaagacctcggtcagccggggtcgtgtctc
cccaggttcaacacgatccccttcctctactgctcgcccagcgagatttgctactacgct
agccgcaatgataaatcctactggctctccacgaccgcatccatacccatgatgcccgtg
gaaaaggaggagataagaccttacatcagcaggtgttcagtatgtgaggctccatctcag
gcagtggcggtccacagtcaggatatgacaatccccaactgtcctatcggctggaggagt
ctctggataggatactccttcctaatgcacacagcagctggtgcagagggcggcggtcag
tccttggtgtctcctggttcctgtctggaggacttccgggcgactccgttcatcgagtgc
aacggcgccaggggcacctgccactactttgccaataaatacagcttctggctgacaacc
gtggatccagaaaatgagtttaccttctcgccagccaaggagacgctgaagggaggccag
gagcgctccagagtcagccgctgccaagtgtgcagcaagatcttgtag
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integrated database retrieval system