Nocardia asteroides: NCTC11293_00277
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Entry
NCTC11293_00277 CDS
T06742
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nad
Nocardia asteroides
Pathway
nad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11293_00277 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_00277 (xthA)
Enzymes [BR:
nad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC11293_00277 (xthA)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC11293_00277 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
VEG31259
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All DBs
Position
1:259196..260011
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AA seq
271 aa
AA seq
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MRLATWNVNSVRSRVDRVIAFLDRHDIDVLAIQETKCRDDQFPYEQFDAAGYEVAHVGLN
QWNGVAIVSRVGLTDVETAFAGQPGFDKNAGDALLESPVVEARAIGATCGGVRVWSLYVP
NGRALGDPHYTYKLNWLSTLRERASEWLADDPEAQIALVGDWNIAPTDDDVWSPEFFEGK
THTSVPERAAFQSVLDTGFRDVMRPFAPGPGVFTYWDYTQLRFPRKEGMRIDFVLASPAL
ADRVKDAHVDREERKGKGASDHAPVIAEFTD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctcgccacctggaacgtcaattcggtccgctcccgcgtggaccgggtgatcgcc
ttcctcgaccgccacgacatcgacgtgctggcgatccaggagaccaagtgccgcgatgac
cagtttccctacgaacagttcgacgcggccggctacgaggtcgcccatgtggggctgaac
cagtggaacggcgtggccatcgtgtcccgggtcggcctcaccgatgtcgagacggccttc
gcgggccagcccggtttcgacaagaacgcgggcgacgcgctgctggaatcgccggtggtc
gaggccagggccatcggcgcgacctgcggcggggtgcgggtgtggagcctctacgtcccc
aacgggcgcgccctcggcgacccgcactacacctacaagctgaactggctgtcgactctg
cgggaacgggcgagcgagtggctggccgacgaccccgaagctcagatcgcgctggtcggc
gactggaacatcgcccccaccgacgacgacgtgtggtcgccggagttcttcgagggcaag
acccacacctcggttccggagcgcgccgccttccagtccgtgctcgacaccggcttccgc
gacgtgatgcgcccgttcgcccccggccccggcgtcttcacctactgggactacacccag
ctgcgtttcccccgtaaggaaggcatgcgcatcgacttcgtgctggcctcccccgccctg
gccgaccgggtgaaggacgcccacgtggaccgggaggaacgcaagggcaagggcgccagc
gaccacgccccggtcatcgcggagttcaccgactga
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