Necator americanus (New World hookworm): NECAME_10829
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Entry
NECAME_10829 CDS
T04867
Name
(RefSeq) c-terminal tandem repeated domain in type 4 procollagen
KO
K06237
collagen type IV alpha
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
NECAME_10829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nai04147
]
NECAME_10829
00536 Glycosaminoglycan binding proteins [BR:
nai00536
]
NECAME_10829
Exosome [BR:
nai04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
NECAME_10829
Glycosaminoglycan binding proteins [BR:
nai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
NECAME_10829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
25350858
NCBI-ProteinID:
XP_013299993
UniProt:
W2T9B3
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search
GAPGPQGPPGAQGIRGFPGPEGLAGPKGQKGAQGPPGPQGPKGDRGPIGVPGFPGNDGAN
GRPGEPGPPGAPGWDGCNGTDGAPGIPGRPGPPGMPGFPGAPGLDGVKGEPAFGYAGLPG
EKGDSGMAGMPGLPGPPGRDGYPGEKGDRGDVGPVGPRGPPGEVGVPGNPGIGSIGPKGD
PGDIGHQGPPGPPGPREFTGSGSIVGPRGNQGEKGFKGEPGEAGPRGYPGNPGLPGQPGL
PGMKGEKGLSGPAGPRGKEGRPGNPGPPGFKGDRGLDGVPGFPGMPGQKGEAGYPGRDGP
KGNMGPPGPPGGGSFTDGPPGPPGLPGRPGNPGPPGSDGFPGTPGPAGPLGQPGGPGAPG
LPGLEGLPGPKGDKGESGIPGAPGVTGPPGMTGAPGPKGEPGARGIPGQSFPGLPGKDGR
PGFDGAPGRKGEQGAPGVRGPPGDSLNGLPGPPGLRGPVGPKGYDGRDGVPGLPGVPGQK
GERGGTCSVCAPGMKGEKGNPGYAGQPGPQGDRGLPGMPGPNGDPGDDGLPGPPGRPGAP
GPPGLDGLPGLPGQKGEPTQLVLRPGPPGYPGMKGEPGFPGLPGSDGIPGTPGLLGPPGL
PGMPGEKGESGSPGLPGKPGKDGLPGLPGFKGEPGYGQPGLPGLAGQKGEAGPPGVPGLP
GVQGPPGPIAPASIVKAGTPGRPGAPGRPGLKGEAGFPGRPGDGGSPGLPGVNGRKGESG
LPGPPGQPGIPGVPGEKGLAGKEGAPGAPGADGIPGLTGQKGDAGLPGLPGVDGQKGDAG
LPGPPGQPGLEGAPGYPGQKGMNGIPGVPGSKGDAGLPGLSGQRGMKGNAGLPGMPGLPG
MKGNAGLPGPPGKDGYPGLPGMKGDRGFSGLPGEKGVPGLAAADGAKGEQGLPGQPGLRG
PQGPPGLSGVPGAKGDSGLPGYGQPGVNGEKGLPGVPGKMGRSGPPGPPGQDGLPGFPGL
KGEPGFLGQSGVPGKDGFPGMPGLKGEIGATGAPGQPGASGQQGAPGVPGSRGDKGSPGL
PGLPGERGLDGIPGLKGDIGHSGQPGLPGLPGPKGSAGAPGFPGLKGNTGFPGKDGLPGL
PGMKGDAGYPGEPGHDGSDGVPGERGAAGLPGQSFPGPQGPTGPPGLPGKDGLPGLLGPK
GESGQPGFPGTLGMKGEPGLPGFPGQKGEPGKAGVPGKRGNDGYPGIPGKDGLPGLPGLK
GEVGAPGPQGSPGIPGLPGMKGDNGLPGFPGQKGESGKPGVPGQPGLPGIKGDAGFPGQP
GREGQPGSDGPQGPPGLPGPSSIVVPGMKGEPGLPGVPGIRGEKGLPGLDGPPGLDGPPG
TPGSRGSDGFPGQPGLPGEKGMAGLPGLPGLDGAPGAPGQPGFPGAPGPSGPSYRDGFLL
VKHSQTTEIPRCPDGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFN
NVCNYASRNDKSYWLSTTAPIPMMPVSEGEIERYISRCSVCEAPANVIAVHSQTIQIPNC
PAGWNSLWIGYSFAMHTGAGAEGGGQSLSLLASKCMRAPPFQEELP
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
ggagctccaggaccgcagggacctcctggtgcgcaaggcattcgcggttttccaggtcct
gaaggattggcagggccaaagggacaaaaaggagcgcagggaccacctggaccacaaggt
ccgaagggggatcgtggacctataggagtacccggattcccaggtaatgatggcgcgaat
ggacgaccaggagagccaggtccacctggtgctcccggctgggatggatgcaatggaaca
gacggagcaccgggaattcctggacgacctggaccaccgggtatgccaggattcccagga
gctccaggattggacggagtgaaaggagagcctgcctttggttatgctggtttaccagga
gaaaagggagatagtggcatggcaggtatgccaggtcttcctgggcctcctggacgagat
ggatatcctggagagaaaggagatagaggagacgttggacctgttggcccgcgaggacct
cctggagaagttggggttccaggcaaccctggaattgggagcatcggaccaaaaggagac
cctggtgatataggacaccagggaccgcccggccctcctgggcctcgcgagttcacagga
agtggctcgattgtaggtccgcgtggaaaccaaggagaaaaaggattcaagggtgaaccg
ggagaagctggtccaagaggttatccaggaaatcccgggctacctggtcaacccggactt
cctggaatgaaaggagaaaaaggcttgtcgggacctgcagggccaaggggcaaagaagga
cggcctggtaatcctgggcctccaggattcaaaggagatcgtggtctcgacggagttcca
ggatttcctggcatgccaggtcaaaagggtgaggcaggataccctggaagagatggaccg
aagggaaacatgggtcctcctggacctcctggaggaggttcgtttaccgatggccctcca
ggtccaccaggattacctggacgtcccggaaatcctggaccaccaggaagcgatggattc
cccggtacaccgggtcctgccggtcctcttgggcagcccggcggtccaggagctcctggc
ttgcctggtctcgaaggtcttccaggtcctaaaggtgacaaaggagagagcggtatacct
ggtgctcctggtgttaccggtccacctgggatgaccggagctcctggacccaaaggagag
cctggcgctcgaggaatacctgggcaaagctttcctggcttgccaggaaaggatgggaga
cctggctttgatggcgcaccaggcaggaaaggagaacagggcgctccaggtgtgagaggt
cctcctggagattccttgaatggtttacctggaccacctggccttcgtggacctgttggt
ccaaagggatatgatggacgagatggagtgcctggtctgccaggtgttcctggtcaaaaa
ggagaacgtgggggaacatgttcagtttgcgctcctggaatgaaaggagagaaaggcaat
cctgggtatgccggacaacctggtccgcagggagaccgtggacttccgggaatgccaggt
cccaatggtgaccctggtgatgacggtctacctggtcctcctggtcgtcctggtgctcct
ggaccacctgggctcgacggtcttccagggcttcctgggcagaaaggagaaccgacgcaa
cttgttctccgacctggacctcctggctatcctggaatgaagggagaacctggctttccc
ggtctaccaggaagtgacggaatacctggaacgcctggacttcttggcccacctggcttg
ccaggaatgcctggagagaagggtgaatcaggatcgcctggtcttcccggtaaacctgga
aaagacggcttgcccggactccccggtttcaaaggcgaacctggatacggacagccaggc
ctgcctggactcgctggacaaaaaggagaagctggaccaccgggagtccccgggttacct
ggtgtacaaggtcctcctggacctattgctcctgctagcattgttaaagctggaacaccc
ggcagacccggggcacctggaagacctggattgaaaggtgaagccggtttccctggaaga
cccggtgatggagggtcaccggggcttcccggcgtgaatggacgtaaaggagagagtggc
ttacctggaccacccggtcaacctggcatacctggcgtaccaggagagaaaggacttgct
ggaaaagaaggtgcaccaggagcacctggagcggatggaattcctggtctgactggacag
aagggcgatgctggactaccaggtctacctggggtggatgggcaaaaaggagatgcagga
cttcctggcccaccaggtcaacctggattggaaggtgctcctggctatccaggtcaaaaa
ggaatgaatggtattcctggagtccctggaagcaaaggagatgccggattacctgggcta
tccggacaacgtggaatgaaaggaaatgctggtcttcctggtatgccaggtttaccagga
atgaaaggtaatgcaggactacctggaccacccggcaaagatgggtatcctgggctccca
ggcatgaagggagatcgtggattcagtgggcttcctggagaaaaaggagtgcctggacta
gctgctgctgatggagcaaaaggagagcaaggacttcccggtcagccaggtctacgcgga
ccccaaggtccacctgggctgtctggcgtcccaggagccaagggagattctggactaccc
gggtatggacaacctggcgttaatggtgagaaaggtttgccgggggttcctggaaagatg
ggacgatcgggacctcctggacctccaggacaggatggcttacctggtttccccggacta
aagggtgaaccgggtttccttggacaaagcggcgttcctggcaaagatgggttcccaggt
atgcctggtctcaagggtgagattggagctactggagctccagggcaaccaggcgcttcc
ggccaacaaggagccccaggcgtccccggaagtcgcggtgacaagggaagtcctggtttg
cccggcctgccaggtgaacgtggacttgacggaatccccggtctcaaaggagacattgga
cactctggccaacctggtcttcccggacttcctggacctaaaggaagtgctggagcgcca
ggatttcctggtttgaagggaaataccggatttcccggaaaagatggtcttcctggtctt
cccgggatgaaaggcgatgctggatatcctggagaacctggtcatgatggatcggatggc
gttccaggagaaagaggagctgctggacttcccgggcaatcattccctgggcctcaagga
ccaactggcccacctgggctacctggaaaagatggtcttcctggcttgctaggtccaaag
ggagaatccggtcaaccaggcttccctggaacactaggaatgaaaggggaacccggatta
ccagggttcccaggacagaaaggtgaaccagggaaagctggcgttcctgggaaacgtgga
aacgatggatatcctggcatacctggaaaggatggactgccgggtcttcctggactcaaa
ggagaagttggagctcctggacctcaaggctcacctggaatacctggtcttccgggcatg
aaaggagacaacggccttcctggtttccctggacaaaaaggcgaatctggcaaacctgga
gtccctggtcaacctggattacctggaattaaaggagatgcaggtttccctggtcaacca
ggtcgcgagggacagcctggctcagatgggcctcaagggcctcctggtttgcctggccct
tctagtattgtcgtacctggcatgaaaggagagccaggtcttcctggcgtacctggaata
cgtggggaaaaaggacttcccggacttgatggaccaccaggtttagacggtccccctgga
acgccaggttctcgtggaagtgacggattccctggtcagccaggtttacctggtgagaaa
ggcatggcagggcttccaggacttcctggtcttgatggagcccctggcgctccgggacaa
ccaggatttccaggagcacccggcccttctgggccttcgtacagggacggctttctgctt
gtgaagcattctcaaactaccgagatccctcgttgtcctgatggtcaaacgaaactttgg
gatggttattcgctgctatacattgaagggaatgaaaagtctcacaaccaagaccttggt
catgctggttcatgtctgcagcgattttcaacaatgccgtttttattctgcgacttcaac
aacgtgtgtaattatgcatcacgaaatgacaaatcttattggctctccaccaccgcacca
ataccaatgatgcctgtcagcgagggagaaattgagcgctacatctctaggtgttccgta
tgcgaagcgccggcaaacgtcattgctgtacactcacaaacgatacaaattccaaactgt
cctgctggctggaacagtctgtggatcggatactccttcgctatgcatactggagctggt
gctgagggaggaggacaatctctcagtttgcttgcatcaaaatgtatgcgagcaccacct
ttccaggaagaactgccataa
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integrated database retrieval system