Nocardiopsis alba: B005_2313
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Entry
B005_2313 CDS
T02218
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
nal
Nocardiopsis alba
Pathway
nal00550
Peptidoglycan biosynthesis
nal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B005_2313
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nal01002
]
B005_2313
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nal01011
]
B005_2313
Enzymes [BR:
nal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
B005_2313
Peptidases and inhibitors [BR:
nal01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
B005_2313
Peptidoglycan biosynthesis and degradation proteins [BR:
nal01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
B005_2313
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
AFR06700
UniProt:
J7L5J4
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Position
2423016..2424623
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AA seq
535 aa
AA seq
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MAPANPHRRARRRDVGWLTASLVTVPLIPLSVIASAAPAMATEHATNELVDELRSDIDAI
LEDPALEGATSGVVVTDADSGEVLYSRDTDASLLPASNMKLFATAAALDVLGPDHTFETE
VVAEEQGPNVPELYLVGGGDPTLSADDLDSMAAEVAASGVTSVGDLYADDTWFDDERLVD
DWWPEDEPYAYSAQISALTVAHGDRYDTGVTEVTVTAGGEGEPVEVAPGAAEGYVEVDNR
AVTGPAGGGNTLSIDRPVGTNTITVTGTLPADAAPSVALRTVDEPAGMAGHVFARALEEN
GVTVEGEIAQGEVPAEWDDPGVVAEHTSMPLEEVLVPLMKFSNNGHTEMLIKSIGRHTAD
EGTWAAGLAGMDEALRGIGVDTSGLVLNDGSGLSRTDRVTAGTVVDLLDRVQDAPWYEVW
HHSLPVAGDEDPFVGGTLASRMRGTPAEGVAQGKTGTMSGVSALSGYVQGPDGGELYFSV
VNNGHAGSAPLHVQDAIVVRLAEYLGHDGARAATLRQDVPVTVGGDLECSWEAAC
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccggccaacccccatcggcgggccagacgacgcgacgtcggatggctgaccgcc
tcactggtgaccgtccctttgatccccctctccgtgatcgcctccgccgccccggcgatg
gcgacggagcacgccacgaacgagctcgtggacgaactgcgctccgacatcgacgcgatc
ctggaggaccccgcgctggagggggcgacctccggtgtcgtcgtcaccgacgcggacagc
ggcgaggtgctgtactcgcgtgacaccgacgcctccctgctgcccgcttccaacatgaag
ctcttcgccaccgccgcggccctggacgtgctcggccccgaccacaccttcgagaccgag
gtcgtggcggaggaacagggcccgaacgtccccgagctgtacctggtcggcggcggcgac
ccgacgctgagcgccgacgacctcgactccatggccgccgaggtcgcggcctccggggtc
acctccgtgggcgacctgtacgcggacgacacctggttcgacgacgagcggctcgtggac
gactggtggcccgaggacgagccgtacgcgtactcggcccagatctccgcgctcaccgtg
gcccacggcgaccgctacgacaccggggtgaccgaggtgaccgtcaccgccggaggtgag
ggagagcccgtcgaggtggcccccggtgccgccgaagggtacgtggaggtcgacaaccgg
gcggtcacgggaccggccggcggtgggaacaccctctcgatcgaccgcccggtgggcacc
aacaccatcacggtgaccgggaccctgccggccgacgccgccccctcggtggcgctgcgc
accgtggacgaaccggcaggcatggccggccacgtgttcgcccgcgcgctggaggagaac
ggcgtcacggtcgaaggggagatcgcccaaggcgaggtccccgccgagtgggacgacccc
ggcgtggtcgccgagcacacctccatgccgctggaagaggtgctcgtccccctgatgaag
ttcagcaacaacggccacacggagatgctgatcaagagcatcggtcgccacaccgccgac
gagggcacgtgggcggccgggctggccgggatggacgaggcgctgcgcgggatcggcgtc
gacacctccggcctcgtgctcaacgacggttcggggctctccaggaccgaccgcgtcacc
gcggggaccgtggtcgacctgctcgaccgggtccaggacgctccgtggtacgaggtctgg
caccactccctgccggtggccggggacgaggacccgttcgtgggcgggaccctggcctcg
cggatgcgcggcacgccggccgaaggggtcgcccagggcaagaccggcaccatgagcggg
gtgagcgccctgtccggctacgtccaagggccggacggcggcgagctgtacttcagcgtg
gtcaacaacggtcacgccgggtcggcgcccctccacgtccaggacgcgatcgtcgtgcgc
ctggccgagtacctgggccatgacggggcacgggcggccaccctccggcaggacgtcccc
gtgacggtcggcggagacctggaatgctcctgggaagccgcctgttaa
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