Natrarchaeobaculum sulfurireducens AArc1: AArc1_0734
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Entry
AArc1_0734 CDS
T05614
Name
(GenBank) Exoribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
nan
Natrarchaeobaculum sulfurireducens AArc1
Pathway
nan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AArc1_0734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nan03019
]
AArc1_0734
03016 Transfer RNA biogenesis [BR:
nan03016
]
AArc1_0734
Enzymes [BR:
nan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AArc1_0734
Messenger RNA biogenesis [BR:
nan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AArc1_0734
Transfer RNA biogenesis [BR:
nan03016
]
Prokaryotic type
tRNA degradation factors
AArc1_0734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AXR77077
UniProt:
A0A346PC32
LinkDB
All DBs
Position
complement(719825..721114)
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AA seq
429 aa
AA seq
DB search
MSDDAQAEAGTAEGQGPVEISEEVARHLENKREELFEKFEIRDAFPEAVLEEARELTDDV
QGDIDAEIDDREDLRELTTWTTDPIDAQDFDDAISIEERDDEYVLWVHIADVTHYVHPDS
AMWDEAVERGNTVYLPGYTIHMLPPVLAESVCSLVPNEERFAHTVEMHLDKETLSYDEID
IYKSVIESDERLTYAQAEKRIEDPDAPLHEENKLVHEVADRMHEIRKEDGSLVLNPARDR
AHTIIEECMLKANKAVTHELMWNRGVEAMYRVHPQPSPDEWSNALQEIQELDGVSIPGDT
WDDPRKAVNATLESAPGRQLDKIQWAVMKVMPRATYMNDPFGGHHALNFEIYGHFTSPIR
RLSDLINHWIVYQNDVPETLLQLCDRASDKQKDAEQCEREYKQFLQEVGLDPMAVNNRGL
EIVEESEAE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacgcacaggccgaagccggcacggccgaagggcagggccccgtcgagatt
agtgaggaggtcgcacgccacctcgagaacaaacgcgaggaactcttcgagaagttcgag
atccgcgatgcgttccccgaggcggtcctcgaggaggcccgagaactcacggacgacgtc
cagggagatatcgatgccgagatcgacgaccgcgaggatctccgagagctgacgacctgg
acgaccgacccgatcgacgcccaggacttcgatgacgccatctcgatcgaagagcgtgac
gacgagtacgtcctctgggtgcacatcgccgacgtgacccactacgtccaccccgactca
gcgatgtgggacgaggccgtcgagcgcggtaacacggtgtacctgccgggctatacgatc
cacatgctgccgccggtgctcgcggagtcggtctgctcgctcgtcccgaacgaagagcgc
ttcgcccacaccgtcgagatgcatctcgataaggagacgctttcgtacgacgagatcgac
atctacaagtccgtcatcgagtccgacgagcggctgacctacgcccaagccgagaaacga
atcgaagatcccgacgccccgctacacgaggagaacaaactcgtccacgaggtcgccgac
cggatgcacgagatccgcaaggaagacggatcgctcgtgctcaacccggcccgtgaccgt
gcccacacgatcatcgaagagtgcatgctgaaagcgaacaaggctgtcacgcacgaactc
atgtggaatcgcggcgtcgaggcgatgtaccgcgttcacccacagccaagccccgacgag
tggtcgaacgccctccaggagattcaagaactcgacggcgtttcgatccccggcgacacc
tgggacgacccccgcaaagccgtcaacgcgacgctcgagtccgcacccggtcgccagctc
gataagatccagtgggccgtgatgaaggtgatgccacgggcgacgtacatgaacgacccg
tttggcggccaccacgcgttgaacttcgagatctacggccacttcacgagccccattcgc
cgtctctcggatctgatcaaccactggatcgtctaccagaacgacgtcccagagaccctc
cttcagctctgtgaccgtgcgagcgacaagcaaaaagacgccgaacagtgcgagcgcgag
tacaagcagttcctccaggaggtcgggctcgaccccatggcggtcaacaaccgtgggctc
gagatcgtggaggagagcgaggccgagtga
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