Nitrospirillum amazonense: Y958_15685
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Entry
Y958_15685 CDS
T04935
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
nao
Nitrospirillum amazonense
Pathway
nao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Y958_15685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nao03400
]
Y958_15685
DNA repair and recombination proteins [BR:
nao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Y958_15685
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Y958_15685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
DnaJ_CXXCXGXG
AAA_29
AAA_16
AAA_25
DUF4350
RsgA_GTPase
PRP4
Motif
Other DBs
NCBI-ProteinID:
ASG22392
UniProt:
A0A248JUI8
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Position
2:complement(504248..506824)
Genome browser
AA seq
858 aa
AA seq
DB search
MHDRHDPEDAADTDTAKAGFVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFS
TLYAEAQRRYLESVSPYARRLFHQMSVPDVDAIEGLPPAVALQQQRGSPTARSSVGSVTT
LSNLLRMLYSRAGDYPPGQPLLEAEAFSANTPEGACPTCHGLGRVHEVTEASMVPDPSLT
IRERAVAAWPTAWGGQNLRDILITLGIDVDTPWRDLPRETRDWILFTEEQPEVPVYPGFS
VAEVREAVRRKLPPNYMGTFSSARRHVMHSFATTHSAMMKKRAASFMVSSACPTCAGRRL
RPESLSVTFEGLDIAAMGQLPLKRIASLFAAYADDGSERLEELRRTRPETAIVIARIAAD
LCRRLAVLLDLGLGYLTLERSTPTLSPGELQRLRLATQVVSNLFGVVYVMDEPSAGLHPA
DTQALLRALDGLKAVGNSLFVVEHDLDVVRHADWIVDVGPAAGEGGGRILYSGPPQGLRR
VAASETARHLFAAEEGQRRTPRAPQGWLRLAGVTRNNLTNLDCAFPLGVMTAVTGISGSG
KSSLVSQALVDLVGKALGAPVAVEEPPAGAEAMLEQEPVAETEGRIEGGPKDALGGIKRL
IRVDQKPIGRTPRSNLATYTGLLDHVRTLFAETPEAKRRRYDAGRFSFNVAKGRCPRCEG
EGFVMVELLFLPSVYAPCPVCHGTRYNAQTLEITYRGKTIADVLGLTVAAASDFFHDVPA
VRRSLDVLRQVGLDYLRLGQPATEFSGGEAQRIKLATELQRAQRGGALYVLDEPTTGLHP
TDVERLVAQLDALVAAGNTVVVVDHDMGVAAASDWVIDIGPGAGDEGGRVVAAGVPAVVA
ASPDSRTAPHLRPFLRLG
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaccgtcatgatcccgaagacgccgccgacacggacacggccaaagccggcttc
gtccgggtgcggggcgcgcgggagcataatctgaagaatgtcgacgtggacattccgcgc
gatgccttggtggtgttcaccggcgtctccggttccggtaaatcctccctggccttcagc
accctctatgccgaggcgcagcgccgttacctggaatcggtatcgccttacgcccgccga
ctgttccaccagatgagcgtgccggacgtggacgccatcgaggggttgccgccggccgtg
gccctgcagcagcagcgcgggtcgcccaccgcgcgctcctccgtcggcagcgtcaccacc
ctgtcgaacctcttgcgcatgctgtactcccgcgccggcgactatccgccgggccagccc
ctgctggaggcggaggccttttccgccaacacgccggagggggcctgccccacctgccat
ggcctgggccgggtgcatgaggtgacggaggccagcatggtgcccgacccgtcgctgacc
atacgcgagcgggcggtggcggcctggcccaccgcctggggcgggcagaacctgcgcgac
atcctgatcaccctaggcatcgacgtcgacacaccctggcgcgacctgccgcgcgagacg
cgcgactggatcctgttcaccgaggaacagcccgaggtgccggtctatcccggcttcagc
gtggcggaagtgcgggaggccgttcgccgcaagctgccgcccaactacatgggcaccttc
tccagcgcgcgccgccatgtcatgcacagcttcgccaccacccacagcgccatgatgaaa
aagcgcgcggcaagtttcatggtcagcagcgcctgccccacctgcgccggccgccgcctg
cggccggaatcgctgtcggtgaccttcgaaggcctcgatatcgcggccatgggccagctg
ccgctgaagcgcatagcgtccctgttcgccgcctatgccgacgatggctcggagcggctg
gaggaattgcgccggacgcggccggaaacggccatcgtcatcgcccgcatcgccgccgac
ctgtgccggcgcctggccgtgctgttggacctgggcctgggctatctgacgctggagcgc
agcacgcctaccctgtcacccggggaattgcagcgcctgcgtctggcgacccaggtcgtc
tcgaacctgttcggcgtggtctatgtgatggacgagccgtcggcgggcctgcacccggcc
gacacccaggcgctgctgcgcgcgctggatgggctgaaggccgtgggcaattccctgttc
gtggtcgagcacgacctggacgtggtgcgccatgccgactggatcgtcgatgtcggcccc
gcggccggcgagggcggcgggcgcatcctgtacagcgggccgccccaggggctgcgccgc
gtggcggcctcagagaccgcccgccacctgttcgctgcggaggagggacagcggcggacg
ccacgcgccccccagggctggctgcgcctggccggcgtcacccgcaacaacctgaccaac
ctggactgcgccttcccgctgggcgtcatgaccgccgtcaccggcatctccggctccggc
aagtccagtctggtcagccaggcgctggtcgacctggtgggcaaggccctgggcgcgccg
gtggcggtggaggagccgccggccggcgccgaggccatgctggaacaggaaccggtggcc
gagaccgagggccgcatcgaaggcgggcccaaggacgcgctgggcggcatcaagcgcctg
atccgggtggaccagaaacccatcggccgcacgccccggtccaacctggcgacatacacc
ggcctgctggaccatgttcgcaccctgttcgcggagacgcccgaggccaagcggcggcgt
tacgatgccggccgcttctccttcaacgtggccaaggggcgctgcccccgctgcgagggc
gagggcttcgtcatggtggaactgctgttcctgcccagcgtctacgccccctgccccgtc
tgccatggcacccgctataacgcccagacgctggagatcacctatcgcggcaagaccatc
gccgacgtcctgggcctgacggtggcggcggcatccgacttcttccatgacgtgccggcc
gtgcgccggtcgctggacgtgctgcgccaggtgggcctcgactatctgcgcctggggcag
ccggccaccgagttctccgggggggaggcgcagcgcatcaagctggcgacggaactgcag
cgggcccagcggggcggcgccctttacgtgctggatgagcccaccacgggcctgcacccc
acggatgtggagcggctggtggcccaactggacgccctggtcgcggccggcaacacggtg
gtggtggtggaccacgacatgggcgtggcggcggccagcgactgggtgatcgacatcggc
cccggcgccggcgacgagggcgggcgtgtggtggcggccggggtgccggcggtggtggcg
gcatcgcccgacagccgcacggccccccacttgcggcccttcctgcgcttgggttag
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