Nicotiana attenuata (coyote tobacco): 109211872
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Entry
109211872 CDS
T05870
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00900
Terpenoid backbone biosynthesis
nau01100
Metabolic pathways
nau01110
Biosynthesis of secondary metabolites
Module
nau_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
109211872
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nau01006
]
109211872
Enzymes [BR:
nau01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
109211872
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
109211872
2.5.1.29 geranylgeranyl diphosphate synthase
109211872
Prenyltransferases [BR:
nau01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
109211872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DACNV
Motif
Other DBs
NCBI-GeneID:
109211872
NCBI-ProteinID:
XP_019231006
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MGRDQSYWASIESEIEAHLKKVISIRPPESVFEPMHYLTFTTPKSTAPALCVAACELVGG
ERAQAMAAASAIHLMHVATYTHQHMHGFGPKPGPAIDHKFGPNIELLTGDGIMSFAIVLL
AKAMSPARENSDKILRVITEVTRAVGSQGLLEGQFRAIEWSQSGNGDEEMLEYVCKKKEG
EIHACGAACGAILGDGSDEEVESLRNYGLYVGTIQGMINGVGRNNKNKRMEELRILAMKE
LQIRFKGKKVSPIASLIEESFVPPSQCDLL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgatcaatcctactgggcctctatcgagtcagaaattgaagcccatcttaag
aaggtcatatcaattaggccacctgaatctgtcttcgagcccatgcattacttgacattt
acaacacccaaatccacagcgccagccttatgcgttgcagcgtgcgagctggtgggtggt
gaaagggcccaagccatggctgcagcatcagcaatacatctcatgcatgttgccacttac
acccaccaacacatgcacggtttcgggcccaagcccgggcctgcaatcgaccacaagttt
ggcccgaatatcgagcttctcacgggagatgggatcatgtcctttgctattgtactacta
gccaaagccatgagcccggcccgagaaaactcggacaagatcttaagggttattactgag
gtcacacgggccgtagggtcacaagggttgctagaaggccagtttagggcgatagaatgg
agtcaatcaggcaatggagatgaggaaatgttagaatacgtgtgcaagaagaaagaagga
gagattcatgcatgtggagctgcttgtggagccattttaggagatggaagtgatgaagaa
gtagagagcttgagaaattatgggctttatgttggaacaatacaaggaatgataaatgga
gtaggcagaaataataaaaacaaaagaatggaagaacttagaatattggccatgaaggaa
ttgcagatacgtttcaaagggaagaaggtgagcccaattgctagtcttattgaagagagt
ttcgtgcctccatcacaatgtgatcttctttag
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integrated database retrieval system
