Nicotiana attenuata (coyote tobacco): 109220782
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Entry
109220782 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109220782
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109220782
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109220782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-ANAPC11
zf-RING_UBOX
zf-RING-like
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109220782
NCBI-ProteinID:
XP_019240793
UniProt:
A0A1J6JS10
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MDHVNSDSQFDVPDTPNRLAAKDLNVRSRVSTESGLSTSGHSGYGNIAGERNENRVYVNG
VGKRRLFMRPPKGINSSMKSEFHANSSASGLGNSIPSRNGVHFTKVSSIPNSNEKHNLHL
SKSENTDSKSQKSSQQNYPVVDLTNKSGSAHVFVKTPTVGAQNGGQVEKCRTRLAAMNEH
SHMHKMTPFIPSSSTNKGKETDGSSSKSHGEKDSAIDKQLGARKDGSASLVYSPRVIGQK
RLVRNGCISPHNIAKAKKPAVKEDNGVLTHGLTGTSLMASTAVTSLDGAKELISKNGISG
TLKGKEVITHSSPSKERETTHPYSRSLISVDEKAKETSDSSRDASRSFGESGGWRSTRNR
SGNMNSSLSSAHRTLDKDSACFVTHSSGSRVTRRDDASNGHDSASIRHVSGESAEPKESV
PGPQCPQINGNRTAVNTVKKRLKQGPAASSHGECSTSASDDLDIILLASPESRINTRSTR
NRNHVSIGVEPVIDVDSPSSTTRYEGSHVVCSSSRNDDARTRQLEADERLARELQEQLYN
EVPSLGVGEIDGDVALALAQEDLLHASSGGGNQLSNLSGSLVANIRRRQSRNASITSRRA
SQARASSSNRMARLRSRFPGQPRTVSSSRGRNSLFPPNMDVDMRMHILETLEAFSNMDVD
GNLLQTQRDFNENDYEMLLALDENNHQHGGASVRQINDLPQSTVQNESLQEACAVCLETP
TVGDVIRHLPCLHKFHKDCIDPWLRRKTSCPVCKCSIT
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgtgaacagcgatagtcaattcgatgttcctgacacccctaatagattagct
gctaaggatctgaatgtgaggagtcgtgtcagcacggagagtggtttatcgacatctggt
cattcaggatatggaaatattgctggtgaacggaatgagaatcgagtttatgttaatggt
gtaggaaaaagaaggctgtttatgcgtcctccaaaaggtatcaatagttccatgaaatct
gaattccatgcgaattcatcagcttccggtttggggaattctatcccttcgagaaatggt
gttcattttactaaagtttcctccattcctaattccaatgagaaacataacttgcacctt
tccaaaagtgaaaacacagattcaaaaagtcaaaagtcttctcagcaaaactaccctgtc
gtagacctgacaaacaaaagtgggtcggcacatgtatttgttaagactcctacagttgga
gcacagaatggtggtcaagttgaaaaatgtagaacacgattggcagcaatgaatgaacac
tctcatatgcacaagatgactccgttcataccatccagcagtaccaacaaaggaaaggaa
actgatggttcaagttctaaatctcatggagaaaaggattctgccattgataagcagctt
ggagctcgaaaagatggttcggcatctcttgtttactcacccagagtaattgggcagaaa
agattggttcgaaacggatgtatatccccgcataacatagctaaggccaaaaagccagct
gtgaaggaggacaatggtgttttaacccatgggctaactggtacaagtcttatggcatca
acagcggttacaagcttagatggtgcaaaagaattgatatctaaaaatggtatctctggt
acattaaagggtaaggaggtgataacgcactcttctccttcaaaagaacgtgaaacaaca
catccgtatagcagaagcttgatatctgttgatgagaaagcaaaggaaacgagtgattcc
agtagagatgcgtccagaagctttggtgaatcaggtggatggagaagtacacgtaaccgt
agtgggaacatgaactcgtctttgtccagtgcgcacaggaccttagataaggatagtgcc
tgctttgtcactcactccagtgggagtagggtgacgagaagagatgatgcaagtaatggt
cacgattcagcttctattagacatgtttctggtgaatctgcagagccaaaggaatccgtt
cctggacctcaatgtccccaaattaatggaaatcgtactgcagtaaacacagttaagaaa
agactaaagcagggacctgctgcaagcagccatggtgaatgttctacatcggcctctgat
gatctagacatcattttgcttgcctcacctgaaagtaggattaatacaaggtccaccaga
aacagaaatcatgttagtataggcgtagaaccggtgattgatgtggacagtccctcctct
accacaagatatgaaggctctcatgttgtatgtagcagtagtaggaatgacgatgctaga
accagacaattagaagctgatgaaaggctggcacgggaactccaagaacaattatataat
gaggtgccttccttaggcgttggcgagattgatggagatgtagccttggctttagcgcag
gaggatctcctacatgcttcctctgggggagggaatcaattatccaatcttagtggatca
ttggttgcaaacatacgcagacgacaatcaagaaatgcatccatcacatctcgtagagct
tctcaagctcgggcttcctcatcaaatagaatggcaaggttgaggagccgtttccctgga
caacctcgtacagtctcatcttctagaggaagaaattcactatttcctcctaatatggat
gtggacatgaggatgcatatattggaaacattagaggctttcagtaatatggatgttgat
ggtaacctccttcagacgcagcgtgacttcaatgagaatgactatgagatgctattggct
cttgatgagaacaaccaccaacacggtggtgcatctgtacgacaaatcaacgacttacct
cagtcaacagttcagaatgagagtcttcaagaagcatgtgcagtttgtcttgaaactcct
actgtgggggacgtgatccgccatcttccttgcttacacaagtttcacaaagattgcatt
gatccatggctgaggagaaaaacatcatgtccagtttgcaagtgttcgataacataa
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