Nicotiana attenuata (coyote tobacco): 109230295
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Entry
109230295 CDS
T05870
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109230295
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
90S particles
Other 90S particles
109230295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
Suf
NRDE-2
FliMN_C
Motif
Other DBs
NCBI-GeneID:
109230295
NCBI-ProteinID:
XP_019251354
LinkDB
All DBs
Position
7:97598858..97623119
Genome browser
AA seq
1398 aa
AA seq
DB search
MCGHTRLDRIQNEVILDKVGVATIEDRMREAQLRWFGHVKSKLEILGSYADATEGLLTHG
WITKIENHGCFVRFYNGVQGFAPRSELGLDPCCEISSMYHVEQVVKCRVTSSNPASRRIN
LSLTTTPSRVSSNELVKPGKVVSGVVERVTADAVVVDVTAQGHFKGTISPQHLADHTGHA
ELMKSALRPGYEFDQLLVLDVEGSNLILSAKHSLATSAQQLPLDVSQVHLNSVLHGYICN
IIESGVFIRYLGRLTGFSPRNRATDDRRSSLSEVYQIGQSVRSNVVDVSSETNRITVSLK
QSSCSSTDASFIQEYFLAEEKIAKLQSVDSGSSDLRWVEEFNLGSTVKGKVHEIKEFGVV
VSFQKYDDVFGFISHYQLGGISVETGSSIQTAVLDVSKIERLVDLSLKPAFVNKSKKETT
NNQAPKKRKREALGELEVNQTVNAVVEIVKENYLVVSLPSYNNTLGYASRADYNTQNLPP
KSFANGESVIATVMAIPSPSTSGRLLLLLKSISEAIETSSSKRAKKKSSYNAGSLVQAEI
TEIRPLELRLKFGSGFHGRVHITEASDDNHAEAPFSNFRFGQTLTARIISKFNMSESIKR
GYQWELSIKPSTLAGSGEVEPVEEFNYSTGQHVTGFVYKVDKEWAWLTISRDVKAQLHVL
DSSSEPSELDEFQKRFSIGRSFSAYVLSANKEKKLVRLISRPLLVDVERSARQKDGPPDH
SSESMAFHIREGSVLGGRISKILPGVGGLLVQIDPHLYGKVHFTELTDPGVADPLSGYHE
GQFVKCKVLETTHSGKGTVHIDLSLQSISHRTQDQKLAVNNDTVNFPGLVEKIEDLRPNM
AVQAYVKNVTPKGCFVMLSRKVDAKVLLSNLSDGYVENPEKEFPVGKLVVGKVVSVEPLS
KRVEVTLRTSSAGGASKSDKDALSNLTVGDVISGRVKRVEPYGLFIIVDQTNMVGLCHVS
EISDDHVNNIDSRYKAGDRVRAKILKVDKERHRISLGMKNSYFNDATSGETNTRHSSGYA
VEGNALSRGIESTPSPERSSQERENLDGESVDGTDLFLAEVESRASVPPLEVPLDDIENL
DVGDVVNQDSGDASNLDTSDEKNKKLAAKKAKRLREQEIRAAEERLLEKDIPRDEDEFEK
LVRSSPNSSFVWIKYMAFVLSLADVEKARSIAERALRTINVREESEKLNVWVAYFNLENE
YGNPPQEAVAKVFQRALQYCDPKKVHLALLGMYERTEQHTLSDELLNKMVKKFKHSCKVW
LRRVQWLLKQSQDGVQSVVNRALLSLPPHKHIKFISQTAILEFKCGVPDRGRSLFEKMLR
EYPKRTDLWSVYLDQEIRLGDADVIRALFERAITLSLPPKKMKFLFKKYLEYEKTLGDVD
RMEAVKRKAMEYVESTLA
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgggcacaccagattagataggattcagaatgaagttattctggacaaggtgggt
gtggccactattgaggacaggatgcgggaagcacaacttagatggtttggacatgttaaa
tcaaaacttgaaattcttggctcttatgctgatgctactgaaggactactaacacacgga
tggataacgaagattgaaaaccacggttgctttgtccgcttttacaatggagtacaagga
tttgcccctagatctgaacttggactagatccgtgctgtgagataagttccatgtatcac
gtagaacaagtggtgaaatgtagagttaccagttctaatccggcttcacgacgtattaac
ctcagtttgacaacaacaccctcaagggtatctagcaatgaactggtcaaaccaggaaag
gttgtttccggagtggttgagcgagtaactgccgatgcagttgtcgtagatgttactgct
cagggtcattttaagggcacaatctctcctcaacacttggctgatcacactggccatgct
gagttgatgaagtctgccttgaggcctgggtatgagtttgatcagcttttggttcttgat
gttgagggcagcaatttaatactctctgcaaaacattctcttgcgacatcagctcagcag
cttccgctggatgttagtcaagtccatcttaactctgtgctgcatgggtatatttgtaat
ataattgaaagtggagtcttcattcgctaccttggtcgtttgactggtttttctccaagg
aacagggctactgatgacagaagatctagtctttctgaagtttaccagattggacagtct
gtccgctctaacgtagttgatgttagcagtgaaacaaatcgaattacagtttctttgaag
cagtcgtcctgctcttcaacagatgcatcctttattcaagaatacttccttgcggaggag
aagattgcaaagctgcagtcggtggactctggaagttctgatttaagatgggtggaagaa
tttaatcttggcagcactgtgaagggaaaagttcatgaaataaaggaatttggtgttgta
gtaagctttcagaaatatgatgatgtttttggttttatctcccactatcagttaggtgga
atctctgtggagactggctcaagtattcagaccgcggtacttgatgtttccaagatagaa
cgcctagtggatctgtctttgaagccagcttttgtgaataaatcaaagaaagagaccacc
aataatcaagccccgaagaaacgcaagagggaagcacttggggaattggaagtaaatcaa
actgtaaatgcagttgtggagattgttaaagaaaattacttggtggtttcactaccatca
tataataacactcttggatatgcatcacgggctgattacaacactcaaaatctaccccct
aaatcatttgccaatggagagagtgtcattgccactgttatggccattccctctccttca
actagtggaagattgctgctgctgcttaaatctattagtgaagctattgaaacgtcgagt
tccaagagggctaaaaagaaatctagttataatgctggatcactggttcaggcggagatt
actgaaataaggccacttgaattgagactgaaatttgggtccggtttccatgggagggtg
cacataacggaggcatcagatgacaatcatgctgaagctccattcagtaacttcagattt
gggcagactcttactgcaaggattatttcaaagttcaatatgtcagaaagtattaagaga
ggctatcagtgggagctatccattaaaccatccacacttgcaggatctggtgaagttgaa
cccgttgaggaattcaattattcaaccggccaacacgttactggctttgtgtacaaagtt
gacaaagaatgggcttggctaacgatatctcgagatgttaaggcccagctgcacgtctta
gatagctcaagtgagcctagtgagctagatgaatttcagaaaaggttctctatcggcagg
tctttttccgcttatgttttaagtgctaataaggagaagaagttggtgcgcttgatttca
cgaccgctgttagttgacgtggaaagatctgcccgtcaaaaagatggcccccctgatcat
tcaagtgaaagtatggcatttcatattcgtgaaggcagtgttttgggtggcaggatttcc
aaaatccttccaggtgttggtgggttgcttgttcagattgatcctcacctatatggtaag
gttcatttcactgaactgacagatccaggggttgctgatccgctgtctggatatcatgaa
ggacaatttgtaaagtgcaaagttctggagactactcattcaggcaagggcactgttcat
attgacctctcgctgcagtctatttcacacagaacccaggatcagaagcttgctgtaaac
aatgacactgtgaattttcctggattggtggagaagatagaggatcttcgtccaaatatg
gcggtgcaggcatatgtgaaaaatgttacaccgaaaggatgtttcgtaatgctttcacgc
aaagttgatgcaaaagttcttctctcaaacttgtctgatggctacgttgaaaacccggag
aaagaattccctgttgggaaacttgtcgttggcaaggtggtgtcggtggaaccattgtct
aagcgagttgaagtcactctaaggacatcaagtgcaggcggtgcttccaagtctgataaa
gatgctctaagtaatttgactgttggggatgtcatatctggcagagttaagcgagttgaa
ccgtatggcttgtttatcatagttgatcagacaaacatggttggattgtgccatgtttca
gagatttctgacgatcatgtcaacaatattgactctagatacaaagctggagatagagtg
agggcaaagattttgaaggtggataaggaaagacatagaatatcacttgggatgaagaat
tcatattttaatgatgctacaagtggtgaaacaaatacaaggcacagttctggttatgca
gtggaaggaaatgctctttccagaggtatcgagtcaactccttcacctgagaggagctcc
caagaacgggagaatcttgacggtgaatctgtagatgggacggacctgttccttgctgaa
gttgaatctcgggcatcagtaccaccattggaggtcccacttgatgatatagaaaatttg
gatgtgggcgatgtagttaatcaagactcaggtgatgctagcaatttagatacttcagat
gaaaagaacaagaaacttgcagcaaagaaagctaaaagattgagggagcaagaaattaga
gctgctgaggaaagattactagaaaaagatattcccagagatgaagatgagtttgagaaa
ttagttagaagttccccaaatagcagctttgtctggataaaatacatggcatttgtgctg
tctttggctgatgttgagaaggcacgctcaattgctgaacgggctttgaggacaataaac
gttcgagaagagtcagagaagctgaatgtttgggttgcctactttaatttagaaaatgag
tatggaaatcccccacaggaagctgttgcaaaagtgttccaaagagcattgcagtattgt
gatcccaaaaaggtgcatctggccttgctaggaatgtatgagaggaccgagcaacacaca
ctctcagatgaactgcttaacaagatggttaagaagttcaagcattcatgcaaggtttgg
ctcaggcgggttcaatggctattgaaacaaagccaagatggagtccagtcagtggtgaat
cgtgctttactaagtcttcctccgcacaagcatattaagtttatttcacagacagctatt
ctagagttcaagtgtggggttcctgacaggggtcgctccttgtttgagaaaatgcttcgc
gagtatcccaagagaactgacttgtggagtgtttatcttgatcaagagattcgactagga
gatgcggatgtgatccgtgctttatttgaaagggcaattactcttagccttccacccaaa
aagatgaagttcctttttaagaagtatcttgagtatgagaagacgcttggtgatgtcgat
cgtatggaggctgtgaaaagaaaagcaatggaatatgttgagagcactcttgcttaa
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