Nicotiana attenuata (coyote tobacco): 109232373
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Entry
109232373 CDS
T05870
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00100
Steroid biosynthesis
nau00909
Sesquiterpenoid and triterpenoid biosynthesis
nau01100
Metabolic pathways
nau01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109232373
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
109232373
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nau01006
]
109232373
Enzymes [BR:
nau01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109232373
Prenyltransferases [BR:
nau01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109232373
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
Motif
Other DBs
NCBI-GeneID:
109232373
NCBI-ProteinID:
XP_019253656
UniProt:
A0A1J6IJ43
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Position
9:46133533..46141173
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AA seq
411 aa
AA seq
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MGSLRAILKNPDDLYPLIKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMD
QFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKVIDRTRTIADVYGAFFDFSCMLKSKVNNDDPNATKTLKRL
EAILKTCRDSGTLNKRKSYIIRSEPNYSPVLIVVIFIILAIVLAQLSGNRS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgagggcgattttgaagaatccagatgatttgtatccattgataaagctt
aaactagcggctcgacacgcggagaaacagatcccgccgtctccacattggggcttctgt
tactcaatgcttcataaggtttctcgtagctttgctctcgtcattcaacaacttcccgtc
gagcttcgtgatgccgtgtgcattttctatttggttcttcgagcacttgacactgttgag
gatgataccagcattcccaccgatgttaaagtacctattctgatctcttttcatcagcat
gtttatgatcgcgaatggcatttttcatgtggtacaaaggagtacaaggttctcatggac
cagttccatcatgtttcaactgcttttctggagcttaggaaacattatcagcaggcaatt
gaggatattaccatgagaatgggtgcaggaatggcaaaattcatatgcaaggaggtggaa
acaaccgatgattatgacgaatattgtcactatgtagctgggcttgttgggctaggattg
tcaaaactgttccatgcctctgggaaagaagatctggcttcagattctctctccaactcc
atgggtttatttcttcagaaaacaaacatcattagagattatttggaggacataaatgaa
gtgcccaagtgccgtatgttctggccccgtgaaatatggagtaaatatgttaacaagctt
gaggaattaaagtacgaggataactcggccaaagcagtgcaatgtctcaatgacatggtc
actaatgctttatcacatgtagaagattgtttgacttacatgtctgctttgcgtgatcct
tccatctttcgattctgtgctattccacaggtcatggcaattgggacattagctatgtgc
tacgacaacattgaagtcttcagaggagtggtaaaaatgagacgtggtctgactgctaag
gtcattgaccggaccaggactattgcagatgtatatggtgctttttttgacttttcttgt
atgctgaaatccaaggttaataatgatgatccaaatgcaacaaaaactctgaagaggctt
gaagcgatcctgaaaacttgcagagattcgggaaccttgaacaaaaggaaatcatacata
atcaggagcgagcctaattatagtcctgttctgattgttgtcattttcatcatactggct
attgttcttgcacagctatctggaaaccgatcttag
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