Nicotiana attenuata (coyote tobacco): 109235725
Help
Entry
109235725 CDS
T05870
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109235725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109235725
03016 Transfer RNA biogenesis [BR:
nau03016
]
109235725
Enzymes [BR:
nau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
109235725
Messenger RNA biogenesis [BR:
nau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
109235725
Transfer RNA biogenesis [BR:
nau03016
]
Prokaryotic type
tRNA degradation factors
109235725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
109235725
NCBI-ProteinID:
XP_019257494
LinkDB
All DBs
Position
1:45935299..45981771
Genome browser
AA seq
887 aa
AA seq
DB search
MAQVEAQGMSGGITLLWNADLVIVDLTMTTQEVNCMVQFIALLQITVETGLIGRQASGAV
TVTDGETIIYTTVCLADVPSEPSDFFPLSVHYQERFSAAGRTSGGFFKREGRTKDHEVLI
CRLIDRPLRPTMLKGFYHETQVLSWVLSYDGLHPPDALAVTAAGIAMALSEVPSSEVIAG
VRIGLVGDKFIVNPTIQEMENSKLDLLLAGTNNAILMIEGYCDFLPEDKLLEAVEVGQDA
VRGICKEVEALVQKCGKPKMLDAIKLPPKELYKLVEEIAGNELVEVLQIKNKIPRRKALS
SLEEKVISILSEKGYISTMEAFGSTETLPDLLEEDEDEEVVVDGEVDEGDVHIKPVARKS
VPLLFSEVDVKLVFKEVTSKLLRKRIVERGKRSDGRTPQEIRVIDARCGLLPRAHGSALF
TRGETQSLAVVTLGDKQMAQKIDNLVDDDEYKRFYLQYSFPPSCVGEAGRVGAPSRREIG
HGMLAERALGPILPPEDDFPYTVRVESTITESNGSSSMASVCGGCLALQDAGVPVKCAIA
GIAMGMVLDTKEFGGDGTPLILSDILGSEDASGDMDFKVAGSDVGITAFQMDIKVGGITL
PIMKQALLQAKDGRKHILAEMSKCSPPPSRKLSKHAPLIHVMKVKPEKINLIIGSGGKKV
KSIIEETGVEAIETQDDGVVKITAKDLSSLEKSKAIISSLTMVPVVGDIYRNCEIKSIAP
YGVFVEIVPGREGLCHISELSANWLAKAEDAFKVGDHLDVKLIEINDKGQLRLSRRALLP
DPEPEKQSAKPRNASLSNDNVVSPKTLDKGKPKKAVTVSNDGSASKSVESLKDKTVPMKL
SSPGKEAAKRLVSPENDGPDKPQTKKSGGNISSKSGNAVVNGEAKVV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagttgaggcacaaggaatgtcgggtggtataactttactatggaatgcagat
ttggtaattgtggatctaacaatgactacacaggaggtgaactgtatggtccagtttatt
gcacttttacagataacggttgagacaggtcttatagggaggcaggctagtggggcagtt
acagttacagatggagaaactattatctatacaactgtttgtttagctgatgtcccaagc
gagccttctgattttttccctctttctgttcattatcaagaacgtttttcagcagctggt
cggacgagtgggggattttttaaacgagaggggaggacaaaagatcatgaggttctcatt
tgtagattgattgataggcctttacgtccaaccatgcttaagggattctaccatgaaact
caagtactttcttgggtattaagttatgacggtttgcatccaccagatgccttggcagtt
acggctgctggaattgctatggctttgtcagaagtaccaagttcagaagttatagcagga
gttcgaattggtcttgttggtgataagttcattgtgaatccaaccattcaggaaatggaa
aactcgaagttggatttgttactagcaggcacaaacaatgcaatattgatgattgagggg
tattgtgattttcttccggaggacaagttgcttgaagctgtagaagttgggcaggatgct
gtgcggggtatctgcaaagaggtggaagctttagtgcaaaaatgtggaaagccaaaaatg
cttgatgcaatcaaattacctcctaaagagctgtataagctagtcgaagaaattgctggc
aatgagttggtggaagtgctacaaattaaaaacaagattccaagaagaaaggcattatca
tcattggaagaaaaagttataagcatattgtctgagaagggttatatcagtacaatggaa
gcttttgggtctactgaaacattaccagatttgctagaggaggacgaggatgaagaagtg
gttgttgatggtgaagttgatgagggtgatgttcacataaagccagttgcaaggaagagt
gtcccattgctgttctctgaggtagatgtgaagctggtattcaaggaagttacttccaaa
cttttgcggaaacgaattgtggagagaggtaagagaagtgatggcaggacccctcaggag
atacgggtgattgacgcacgctgtggactgcttcccagggcacatgggagtgctctcttc
actcgaggtgaaacacagtcattggcggtggtaacacttggtgataagcaaatggcacag
aagatagacaaccttgtggatgatgatgaatacaagagattttatcttcagtattcgttt
ccaccctcatgcgttggtgaagctgggcgtgtaggggcaccatcaagaagagaaattggt
catggaatgcttgcagagagagctcttggaccaatactgcctcctgaagatgacttccct
tacactgttcgtgttgagagtaccatcactgaaagcaatggctcatcgagtatggcatct
gtatgtggtgggtgcttagcattgcaagatgctggtgttcctgttaagtgtgctatcgct
ggtattgcaatgggtatggttctggacacaaaggaatttggtggagatggaactccactc
atcctttctgacatattgggttctgaagatgcatcaggagatatggatttcaaggttgct
ggaagtgatgttggtattaccgcgtttcagatggacataaaggtaggaggaattacgttg
ccaatcatgaaacaagctctcttacaagcaaaagatggacgaaagcacattcttgctgag
atgtcaaaatgctcgccacccccttcaagaaagctctcaaagcatgctccgctaatccat
gttatgaaggttaaaccagaaaaaataaacctcatcattggctctggggggaagaaggtg
aagagcattattgaagaaactggtgttgaagctattgaaacacaagatgatggcgtggta
aaaataactgcaaaggacttgtcaagcctggaaaagtcaaaagccatcataagtagtcta
acgatggttccggttgttggtgacatatataggaattgtgagattaaatctattgcacct
tatggagtttttgtggagattgtgcctggacgagagggattatgccatatcagtgagctg
agtgcaaattggctagccaaggctgaagatgctttcaaagtaggagaccacctggatgtc
aagctcattgagatcaatgacaaggggcaacttcgtttgagccggcgtgcattactccct
gatcccgagccagagaagcaaagtgcaaagccacgcaacgctagcctttcaaatgacaat
gtagtttcaccaaaaactttagataagggtaaacctaagaaagctgtgaccgtatcaaat
gatggttcagcatcaaaaagtgtggaatctctcaaggacaaaacagttcctatgaagtta
tcaagcccagggaaagaagcagccaagagattagtaagtccagaaaatgatggaccagac
aagccccaaacgaagaaaagtggcggcaacatctccagcaaaagcggaaatgcagtagtc
aatggagaggcaaaagttgtataa
DBGET
integrated database retrieval system
